RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ZNF628Q5EBL2 1059 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 C6orf136Q5SQH8 315 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 FAM71E1Q6IPT2 247 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 OGFOD2Q6N063 350 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 NOXRED1Q6NXP6 359 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 RTL4Q6ZR62 310 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 SLC29A4Q7RTT9 530 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 SPATA19Q7Z5L4 167 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 OR52R1Q8NGF1 315 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 CLHC1Q8NHS4 586 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 CTHRC1Q96CG8 243 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 SPACA9Q96E40 222 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-209ENST00000477554 ART5Q96L15 291 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 TTTY12Q9BZ98 90 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 SIRT5Q9NXA8 310 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 EHD3Q9NZN3 535 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 TNFRSF10DQ9UBN6 386 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 DYRK3O43781 588 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 CDC40O60508 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
PTPN7-209ENST00000477554 RFPL3SP0C7P2 107 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 MAPK1P28482 360 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 EMDP50402 254 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 IRX1P78414 480 aaPredicted RBP16.24■□□□□ 0.19
PTPN7-209ENST00000477554 EMX2Q04743 252 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 C2orf80Q0P641 193 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 MAP4K2Q12851 820 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 RFTN2Q52LD8 501 aaPredicted RBP16.24■□□□□ 0.19
PTPN7-209ENST00000477554 OPN5Q6U736 354 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 TICAM1Q8IUC6 712 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 LRRC25Q8N386 305 aaPredicted RBP16.24■□□□□ 0.19
PTPN7-209ENST00000477554 FNDC5Q8NAU1 212 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 FAM13CQ8NE31 585 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 FAIM2Q9BWQ8 316 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 MRGBPQ9NV56 204 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 PLEKHB1Q9UF11 243 aaPredicted RBP16.24■□□□□ 0.19
PTPN7-209ENST00000477554 BCAP29Q9UHQ4 241 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 BAIAP2L1Q9UHR4 511 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 ZNF835Q9Y2P0 537 aa16.24■□□□□ 0.19
PTPN7-209ENST00000477554 A0A1B0GTH9 108 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 LRRC3CA6NJW4 275 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 E9PBE3 544 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 KLRC4-KLRK1H3BQV0 150 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 TFECO14948 347 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-209ENST00000477554 UBDO15205 165 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 GUCY1B2O75343 617 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 GLSO94925 669 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-209ENST00000477554 MAGEA5P43359 124 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 RPL38P63173 70 aaKnown RBP16.23■□□□□ 0.19
PTPN7-209ENST00000477554 ZNF763Q0D2J5 394 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 ZNF385BQ569K4 471 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 GPALPP1Q8IXQ4 340 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 FAM98AQ8NCA5 519 aaKnown RBP16.23■□□□□ 0.19
PTPN7-209ENST00000477554 OR7G2Q8NG99 324 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 CCDC120Q96HB5 630 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 SLC35C2Q9NQQ7 365 aa16.23■□□□□ 0.19
PTPN7-209ENST00000477554 NOP53Q9NZM5 478 aaKnown RBP16.23■□□□□ 0.19
PTPN7-209ENST00000477554 CNOT11Q9UKZ1 510 aaKnown RBP16.23■□□□□ 0.19
PTPN7-209ENST00000477554 EIF3LQ9Y262 564 aaKnown RBP16.23■□□□□ 0.19
PTPN7-209ENST00000477554 OR6C76A6NM76 312 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 CDK2AP1O14519 115 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 CCDC22O60826 627 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 DCTN3O75935 186 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 SDC1P18827 310 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 DDCP20711 480 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 CNR1P21554 472 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 CA7P43166 264 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 CORO7P57737 925 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 PPIAP62937 165 aaKnown RBP16.22■□□□□ 0.19
PTPN7-209ENST00000477554 ADORA2A-AS1P86434 159 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 GABPB1Q06547 395 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-209ENST00000477554 NPSR1Q6W5P4 371 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 WDR53Q7Z5U6 358 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-209ENST00000477554 SPPL2CQ8IUH8 684 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 RPRMLQ8N4K4 120 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 TMEM251Q8N6I4 163 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 GOLM1Q8NBJ4 401 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 SLC22A8Q8TCC7 542 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 PAQR8Q8TEZ7 354 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 RELTQ969Z4 430 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 MYNNQ9NPC7 610 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 SACM1LQ9NTJ5 587 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 ZNF780BQ9Y6R6 833 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 FREM3P0C091 2139 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 CELSR2Q9HCU4 2923 aa16.22■□□□□ 0.19
PTPN7-209ENST00000477554 C17orf51A8MQB3 221 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 CCL21O00585 134 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 ADAM10O14672 748 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 AKAP10O43572 662 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 PRPS2P11908 318 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 DRD2P14416 443 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 NCF2P19878 526 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-209ENST00000477554 EFNA1P20827 205 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-209ENST00000477554 CEBPEQ15744 281 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 NTRK2Q16620 822 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 GSTA3Q16772 222 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 FAM9CQ8IZT9 166 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 OR7G1Q8NGA0 311 aa16.21■□□□□ 0.19
PTPN7-209ENST00000477554 CIDECQ96AQ7 238 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-209ENST00000477554 FCRL1Q96LA6 429 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms