RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	CRB3	Q9BUF7	120 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GATA5	Q9BWX5	397 aa	Predicted RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SHCBP1L	Q9BZQ2	653 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TWSG1	Q9GZX9	223 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NSRP1	Q9H0G5	558 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MLXIPL	Q9NP71	852 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ASCL3	Q9NQ33	180 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	VPS29	Q9UBQ0	182 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	EMCN	Q9ULC0	261 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	EIF3L	Q9Y262	564 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMED5	Q9Y3A6	229 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RNF11	Q9Y3C5	154 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PTRH2	Q9Y3E5	179 aa	Known RBP	4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RAP2C	Q9Y3L5	183 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NAALAD2	Q9Y3Q0	740 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MAU2	Q9Y6X3	613 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ASXL3	Q9C0F0	2248 aa		4.23	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CEP250	Q9BV73	2442 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ANKRD12	Q6UB98	2062 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF292	O60281	2723 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IGKV1-8	A0A0C4DH67	115 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LRIT2	A6NDA9	550 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LRRC14B	A6NHZ5	514 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MAGEB17	A8MXT2	336 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SGK494	L7N484	410 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	AGPS	O00116	658 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SAP18	O00422	153 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MANBA	O00462	879 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR7A17	O14581	309 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	KLF11	O14901	512 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CASC3	O15234	703 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GALR3	O60755	368 aa	Predicted RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SH3BGRL	O75368	114 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RDH16	O75452	317 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CREG1	O75629	220 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RSL1D1	O76021	490 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PDYN	P01213	254 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	STATH	P02808	62 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IFNA16	P05015	189 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FGF4	P08620	206 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ICAM2	P13598	275 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CHN1	P15882	459 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CREB1	P16220	341 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TNNI3	P19429	210 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WT1	P19544	449 aa	Predicted RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BGN	P21810	368 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PTPN4	P29074	926 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OTX2	P32243	289 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	EIF2S3	P41091	472 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CCR10	P46092	362 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	XCR1	P46094	333 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ASMT	P46597	345 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR1D4	P47884	311 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GABRA4	P48169	554 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RPL14	P50914	215 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NEK2	P51955	445 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MAPK12	P53778	367 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	EMP2	P54851	167 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RAB38	P57729	211 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TRA2B	P62995	288 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BTK	Q06187	659 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC13A2	Q13183	592 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLAMF1	Q13291	335 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SERTAD2	Q14140	314 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	HEPACAM	Q14CZ8	416 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NCF4	Q15080	339 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TNFAIP8L3	Q5GJ75	292 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ARL13A	Q5H913	290 aa	Predicted RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NXN	Q6DKJ4	435 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZCCHC23	Q6ZST2	131 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	VN1R4	Q7Z5H5	301 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PEG10	Q86TG7	708 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GPR180	Q86V85	440 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF595	Q8IYB9	648 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PRSS58	Q8IYP2	241 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	METTL27	Q8N6F8	245 aa	Predicted RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ENDOV	Q8N8Q3	282 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C9orf106	Q8NAJ2	232 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CLEC1A	Q8NC01	280 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR9A4	Q8NGU2	314 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR51Q1	Q8NH59	317 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CDC26	Q8NHZ8	85 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WDR20	Q8TBZ3	569 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	STT3B	Q8TCJ2	826 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	AGR3	Q8TD06	166 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	UTP15	Q8TED0	518 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CREB3L4	Q8TEY5	395 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CT55	Q8WUE5	264 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TWIST2	Q8WVJ9	160 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	THAP4	Q8WY91	577 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TANK	Q92844	425 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RAB24	Q969Q5	203 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMEM125	Q96AQ2	219 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TBC1D20	Q96BZ9	403 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TUBGCP3	Q96CW5	907 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MS4A6E	Q96DS6	147 aa		4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RBM18	Q96H35	190 aa	Known RBP	4.22	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	METTL2A	Q96IZ6	378 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms