RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TMEM64Q6YI46 380 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 HSDL2Q6YN16 418 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 LINC00696Q6ZRV3 163 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 SPATA21Q7Z572 469 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 WDR53Q7Z5U6 358 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 RPS19BP1Q86WX3 136 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 MSRB3Q8IXL7 192 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 SAMD14Q8IZD0 417 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 FAM9CQ8IZT9 166 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 BEST3Q8N1M1 668 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CLEC4FQ8N1N0 589 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 MIER2Q8N344 545 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 RBMXL3Q8N7X1 1067 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 TEX19Q8NA77 164 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 OR7G1Q8NGA0 311 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 OR52R1Q8NGF1 315 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 OR8K3Q8NH51 312 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 GOT1L1Q8NHS2 421 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 NUBPLQ8TB37 319 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CPT1CQ8TCG5 803 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 HOXB13Q92826 284 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ERP27Q96DN0 273 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 FAM120BQ96EK7 910 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ZBED6CLQ96FA7 236 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 C16orf58Q96GQ5 468 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 VPS50Q96JG6 964 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CCDC115Q96NT0 180 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 LMF1Q96S06 567 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ELAC2Q9BQ52 826 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 SLC25A23Q9BV35 468 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 DEFB126Q9BYW3 111 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 NMUR2Q9GZQ4 415 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 WWTR1Q9GZV5 400 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 FAM107BQ9H098 131 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 NXF5Q9H1B4 397 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 OR10A5Q9H207 317 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 SERHL2Q9H4I8 314 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CDCP1Q9H5V8 836 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 EPS8L2Q9H6S3 715 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 GPATCH2Q9NW75 528 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 PLA2G3Q9NZ20 509 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 SLAMF8Q9P0V8 285 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 MYOTQ9UBF9 498 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 TP53TG5Q9Y2B4 290 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 GPR55Q9Y2T6 319 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ANKHD1Q8IWZ3 2542 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 A0A1W2PRB8 838 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 FAM234BA2RU67 622 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 RNASET2O00584 256 aaKnown RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 FBP2O00757 339 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 ADAM10O14672 748 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 OR2J2O76002 312 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 OR6B1O95007 311 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 F10P00742 488 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 IFI6P09912 130 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 NCF2P19878 526 aaPredicted RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 S100A3P33764 101 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 TRHRP34981 398 aaPredicted RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 RPL3P39023 403 aaKnown RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 CD96P40200 585 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 MVDP53602 400 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 PSG6Q00889 435 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 SQLEQ14534 574 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 RPS6KA2Q15349 733 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 TESK1Q15569 626 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 GTDC1Q4AE62 458 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 VPS26BQ4G0F5 336 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 TIGD2Q4W5G0 525 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 AGKQ53H12 422 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 PIGGQ5H8A4 983 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 CRB2Q5IJ48 1285 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 PAGE3Q5JUK9 113 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 AGAP7PQ5VUJ5 663 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 SP5Q6BEB4 398 aaPredicted RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 DESI1Q6ICB0 168 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 MYO7BQ6PIF6 2116 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 ISLR2Q6UXK2 745 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 RNF111Q6ZNA4 994 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 GK5Q6ZS86 529 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 RETREG3Q86VR2 466 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 TREML1Q86YW5 311 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 LGI4Q8N135 537 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 GLB1L3Q8NCI6 653 aaPredicted RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 CATSPER1Q8NEC5 780 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 C7orf57Q8NEG2 295 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 OR4N2Q8NGD1 307 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 OR5P2Q8WZ92 322 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 GTF2H4Q92759 462 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 MAGED4Q96JG8 741 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 LURAP1Q96LR2 239 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 RILPQ96NA2 401 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 AGAP4Q96P64 663 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 BTBD9Q96Q07 612 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 OR52E6Q96RD3 313 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 RASL10BQ96S79 203 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 CCT8L2Q96SF2 557 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 PRPF18Q99633 342 aaKnown RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 ITPAQ9BY32 194 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 MYLK2Q9H1R3 596 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 TRIM45Q9H8W5 580 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms