RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NCCRP1Q6ZVX7 275 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 RPS27LQ71UM5 84 aaKnown RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 MTDHQ86UE4 582 aaKnown RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 SAMD14Q8IZD0 417 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 LRRC25Q8N386 305 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 MARVELD2Q8N4S9 558 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 ACBD4Q8NC06 268 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 OR10G3Q8NGC4 313 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 LILRB4Q8NHJ6 448 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 CHTF18Q8WVB6 975 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 ADIPOR1Q96A54 375 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 L3HYPDHQ96EM0 354 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 CXorf56Q9H5V9 222 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF703Q9H7S9 590 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 STOML1Q9UBI4 398 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 B4GALT7Q9UBV7 327 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 MID2Q9UJV3 735 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 CNOT11Q9UKZ1 510 aaKnown RBP12.41□□□□□ -0.42
HMGN1-211ENST00000471260 NPFFR2Q9Y5X5 522 aa12.41□□□□□ -0.42
HMGN1-211ENST00000471260 A0A0G2JND7 137 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 ATP6AP2A0A1C7CYW4 349 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 SERTM1A2A2V5 107 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 FAM47E-STBD1D6RA91 191 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 GOLGA8RI6L899 631 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 MANBAO00462 879 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 ATP6AP2O75787 350 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 BCAS2O75934 225 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-211ENST00000471260 ENO1P06733 434 aaKnown RBP12.4□□□□□ -0.42
HMGN1-211ENST00000471260 BPGMP07738 259 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 GABRA1P14867 456 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 S1PR1P21453 382 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 BGNP21810 368 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 GRK2P25098 689 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 ACVR2AP27037 513 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 HMOX2P30519 316 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 SSTR2P30874 369 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 KIR3DL1P43629 444 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 GSTM5P46439 218 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 PKNOX1P55347 436 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 PMPCAQ10713 525 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 SF3A3Q12874 501 aaKnown RBP eCLIP12.4□□□□□ -0.426e-7■□□□□ 11.3
HMGN1-211ENST00000471260 PRICKLE4Q2TBC4 344 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 SPIN4Q56A73 249 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 PRAMEF20Q5VT98 475 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 TMEM198Q66K66 360 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 VWA5B2Q8N398 1253 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 C1orf52Q8N6N3 182 aaKnown RBP12.4□□□□□ -0.42
HMGN1-211ENST00000471260 CDYL2Q8N8U2 506 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 OR5M3Q8NGP4 307 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 METTL6Q8TCB7 284 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 DOK4Q8TEW6 326 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 CTHRC1Q96CG8 243 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 C14orf79Q96F83 325 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 TREX2Q9BQ50 279 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-211ENST00000471260 DOHHQ9BU89 302 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 SHCBP1LQ9BZQ2 653 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 C1orf21Q9H246 121 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 PROK2Q9HC23 129 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 PNPLA3Q9NST1 481 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 THAP1Q9NVV9 213 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 HEY2Q9UBP5 337 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF639Q9UID6 485 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 ACAD8Q9UKU7 415 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF780BQ9Y6R6 833 aa12.4□□□□□ -0.42
HMGN1-211ENST00000471260 PHF3Q92576 2039 aaKnown RBP12.4□□□□□ -0.42
HMGN1-211ENST00000471260 A0A1W2PS29 197 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 C19orf84I3L1E1 186 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 ACOX3O15254 700 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 TRIM3O75382 744 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-211ENST00000471260 ERAL1O75616 437 aaKnown RBP12.39□□□□□ -0.43
HMGN1-211ENST00000471260 ESRRBO95718 433 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 DRD2P14416 443 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 ACADSP16219 412 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 CLNS1AP54105 237 aaKnown RBP12.39□□□□□ -0.43
HMGN1-211ENST00000471260 DCAF7P61962 342 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 LCP2Q13094 533 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 HEPACAMQ14CZ8 416 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 ZNF585AQ6P3V2 769 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 TMEM81Q6P7N7 255 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 B3GNT6Q6ZMB0 384 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 NUDCD3Q8IVD9 361 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 WDR75Q8IWA0 830 aaKnown RBP12.39□□□□□ -0.43
HMGN1-211ENST00000471260 SPPL2AQ8TCT8 520 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 DIO2Q92813 273 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 MCUR1Q96AQ8 359 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 HSPBAP1Q96EW2 488 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 ZNF597Q96LX8 424 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 TTYH2Q9BSA4 534 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 ANGPTL4Q9BY76 406 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 EXO5Q9H790 373 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 SIRT5Q9NXA8 310 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 MAT2BQ9NZL9 334 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 PRODH2Q9UF12 536 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 TRIM33Q9UPN9 1127 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 RNF6Q9Y252 685 aa12.39□□□□□ -0.43
HMGN1-211ENST00000471260 NINQ8N4C6 2090 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms