RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SPG11Q96JI7 2443 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 A0A0A6YYD5 115 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 A0A1B0GVC2 190 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 GNG14A0A1W2PPG7 69 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PINLYPA6NC86 204 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 A8MVJ9 347 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 NPIPA2E9PIF3 369 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 NPIPA3F8WFD2 350 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 RTCAO00442 366 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 EBAG9O00559 213 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 BCKDKO14874 412 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PRKNO60260 465 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 GUCY1B2O75343 617 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 OR2J2O76002 312 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ZFAND5O76080 213 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PDE9AO76083 593 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 GLSO94925 669 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 KLK1P06870 262 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ANXA4P09525 319 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 G6PDP11413 515 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 CD99P14209 185 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 GPX3P22352 226 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ATP5A1P25705 553 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ACVR2AP27037 513 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 RPL3P39023 403 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 MAPK12P53778 367 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 IST1P53990 364 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 CLNS1AP54105 237 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 MTTPP55157 894 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 CLDN8P56748 225 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 RAB38P57729 211 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 C21orf58P58505 322 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PPIAP62937 165 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 BTN3A2P78410 334 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 FOLH1Q04609 750 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 MYBPHQ13203 477 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 MAPRE2Q15555 327 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ELAVL1Q15717 326 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 CCNYL2Q5T2Q4 361 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 NDUFAF5Q5TEU4 345 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 B3GNT6Q6ZMB0 384 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF793Q6ZN11 406 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 IKBIPQ70UQ0 350 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 SLC22A16Q86VW1 577 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 FITM2Q8N6M3 262 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ACOT4Q8N9L9 421 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 GLB1L3Q8NCI6 653 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 OR5M3Q8NGP4 307 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 MARK4Q96L34 752 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 RASL10BQ96S79 203 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ZBTB18Q99592 522 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 TTYH2Q9BSA4 534 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 CCDC106Q9BWC9 280 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 EBPLQ9BY08 206 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 TTTY12Q9BZ98 90 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 DPY30Q9C005 99 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 DEFB127Q9H1M4 99 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 MYNNQ9NPC7 610 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PRDM7Q9NQW5 492 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PRTFDC1Q9NRG1 225 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PNO1Q9NRX1 252 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 PNPLA3Q9NST1 481 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 HPF1Q9NWY4 346 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 LYARQ9NX58 379 aaKnown RBP8.37□□□□□ -1.07
SF3A1-206ENST00000471037 MYOTQ9UBF9 498 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 L3MBTL1Q9Y468 752 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 FAM215AQ9Y5M1 114 aa8.37□□□□□ -1.07
SF3A1-206ENST00000471037 ITPR3Q14573 2671 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PHF3Q92576 2039 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 A0A0G2JN53 185 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 CCT8L1PA6NM43 557 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 CAPN14A8MX76 684 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 CLDN4O14493 209 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 ANKRD28O15084 1053 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 B3GALT2O43825 422 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 EEDO75530 441 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 SLC22A3O75751 556 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 OR6B1O95007 311 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 NADKO95544 446 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 FAM58BPP0C7Q3 252 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 DDX5P17844 614 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PRPS1L1P21108 318 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 TACR1P25103 407 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 CERS1P27544 350 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PIK3R1P27986 724 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PRDX6P30041 224 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PPP2R1BP30154 601 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 HPCAL1P37235 193 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 SOX3P41225 446 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 ZFP36L2P47974 494 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 HNRNPFP52597 415 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PLGLB1Q02325 96 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 KLF10Q13118 480 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 RUNX2Q13950 521 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PTGR1Q14914 329 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 KRT72Q14CN4 511 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 HYAL4Q2M3T9 481 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 DPY19L1Q2PZI1 675 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms