RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RAP2CQ9Y3L5 183 aa12.99□□□□□ -0.33
TOP3B-215ENST00000470338 PHF3Q92576 2039 aaKnown RBP12.99□□□□□ -0.33
TOP3B-215ENST00000470338 ATP6AP2A0A1C7CYW4 349 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 LRRC3CA6NJW4 275 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 UPK1AO00322 258 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 AKAP10O43572 662 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 CDC40O60508 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ZG16O60844 167 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 TRIM3O75382 744 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 SKAP2O75563 359 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ATP6AP2O75787 350 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 LRATO95237 230 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 PSMG1O95456 288 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ABOP16442 354 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 BGNP21810 368 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 MAPK1P28482 360 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 PTGS2P35354 604 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 CASP3P42574 277 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 FRKP42685 505 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 MAGEA5P43359 124 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 SLC1A6P48664 564 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 PSPHP78330 225 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 RPP38P78345 283 aaKnown RBP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 NNATQ16517 81 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ATP6AP1LQ52LC2 224 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ZNF385BQ569K4 471 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 MTFR2Q6P444 385 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ARHGAP11AQ6P4F7 1023 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 DOLPP1Q86YN1 238 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 SLC34A3Q8N130 599 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 OR2L13Q8N349 312 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ZNF781Q8N8C0 355 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 CLHC1Q8NHS4 586 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 FAM57AQ8TBR7 257 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 HGDQ93099 445 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 PPCDCQ96CD2 204 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 OMA1Q96E52 524 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 ELP4Q96EB1 424 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 FOLH1BQ9HBA9 442 aa12.98□□□□□ -0.33
TOP3B-215ENST00000470338 PLEKHB1Q9UF11 243 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 BOKQ9UMX3 212 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-215ENST00000470338 A0A1B0GVC2 190 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM120BA0PK00 339 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 PRRG2O14669 202 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 PDPK1O15530 556 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 COQ9O75208 318 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 NME6O75414 186 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 ERN1O75460 977 aaKnown RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 PDE9AO76083 593 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 SNX4O95219 450 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 CLDN1O95832 211 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 RFPL3SP0C7P2 107 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 PRPS2P11908 318 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 MC3RP41968 323 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 RPL14P50914 215 aaKnown RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 CORO7P57737 925 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 MAGOHP61326 146 aaKnown RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 PLCXD2Q0VAA5 305 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 STX3Q13277 289 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 CASP8Q14790 479 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 SLC10A1Q14973 349 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 SMU1Q2TAY7 513 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 HHATQ5VTY9 493 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM198Q66K66 360 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 BICRALQ6AI39 1079 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 ANKRD26P1Q6NSI1 321 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 R3HCC1LQ7Z5L2 792 aaKnown RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 KIRREL3Q8IZU9 778 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 LIX1Q8N485 282 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 CIDECQ96AQ7 238 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 CCDC120Q96HB5 630 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 DOHHQ9BU89 302 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 ZNF703Q9H7S9 590 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 QPCTLQ9NXS2 382 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 SH3BP4Q9P0V3 963 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 SUCOQ9UBS9 1254 aaKnown RBP12.97□□□□□ -0.33
TOP3B-215ENST00000470338 ATP6V1HQ9UI12 483 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 SH3BGRL2Q9UJC5 107 aa12.97□□□□□ -0.33
TOP3B-215ENST00000470338 CRYBG3Q68DQ2 2970 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 NBPF19A0A087WUL8 3843 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 OR6C70A6NIJ9 312 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 ADAM10O14672 748 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 SUSD5O60279 629 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 TSPAN2O60636 221 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 UGT2B11O75310 529 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 CELA3AP09093 270 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 PSG6Q00889 435 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 EMX2Q04743 252 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 BST1Q10588 318 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 SNTA1Q13424 505 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 FNDC7Q5VTL7 733 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 IL23RQ5VWK5 629 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 DESI1Q6ICB0 168 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 TRILQ7L0X0 811 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 MAMDC2Q7Z304 686 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms