RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 OR56A1Q8NGH5 318 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 DIO2Q92813 273 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 MS4A6EQ96DS6 147 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 INSM2Q96T92 566 aaPredicted RBP12.83□□□□□ -0.35
BRCA1-209ENST00000470026 GDF15Q99988 308 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 SLX1AQ9BQ83 275 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 SLC22A4Q9H015 551 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 TPK1Q9H3S4 243 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 KLHL31Q9H511 634 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 TIGARQ9NQ88 270 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 A0A0G2JN53 185 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 MEIOCA2RUB1 952 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 PRICKLE3O43900 615 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-209ENST00000470026 NFATC1O95644 943 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 FHP07954 510 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 PKLRP30613 574 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 SDC2P34741 201 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 IFNGR2P38484 337 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 BCL6P41182 706 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 VIPR2P41587 438 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 OMPP47874 163 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 MTNR1AP48039 350 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 RAB28P51157 221 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 MXD1Q05195 221 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 LASP1Q14847 261 aaKnown RBP12.83□□□□□ -0.36
BRCA1-209ENST00000470026 SLC35F1Q5T1Q4 408 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 PRICKLE2Q7Z3G6 844 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 GJD3Q8N144 294 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 RAB42Q8N4Z0 105 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 POGLUT1Q8NBL1 392 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 ANKK1Q8NFD2 765 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 OR2L8Q8NGY9 312 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 TEX47Q8TBZ9 253 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 BBS4Q96RK4 519 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 PHOX2BQ99453 314 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 SLC38A1Q9H2H9 487 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 EGLN3Q9H6Z9 239 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 PRSS16Q9NQE7 514 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 LIPT1Q9Y234 373 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 YARS2Q9Y2Z4 477 aaKnown RBP12.83□□□□□ -0.36
BRCA1-209ENST00000470026 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
BRCA1-209ENST00000470026 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 IGLON5A6NGN9 336 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 PRR19A6NJB7 356 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 SLC30A4O14863 429 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 PGRMC2O15173 223 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 IDH3BO43837 385 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 PRKRAO75569 313 aaKnown RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 HLA-DQB1P01920 261 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ALPPP05187 535 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 HIST1H1TP22492 207 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 AZGP1P25311 298 aaKnown RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 DRD3P35462 400 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ACSM1Q08AH1 577 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 SLAMF1Q13291 335 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 TRAM2Q15035 370 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 DDI2Q5TDH0 399 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 AADACL4Q5VUY2 407 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ABHD17CQ6PCB6 329 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 FAM131AQ6UXB0 335 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 SZRD1Q7Z422 152 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 AP3S1Q92572 193 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 UFD1Q92890 307 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 TMEM203Q969S6 136 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 COQ7Q99807 217 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 POLMQ9NP87 494 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 IL23AQ9NPF7 189 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 PCDH10Q9P2E7 1040 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ATG4BQ9Y4P1 393 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 KCNE3Q9Y6H6 103 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 KLF4O43474 513 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 GUCY1B2O75343 617 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 TCEA1P23193 301 aaKnown RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ATP5A1P25705 553 aaKnown RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 AHRP35869 848 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 TRIM23P36406 574 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 BUD31P41223 144 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 IL12RB1P42701 662 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 FABP5Q01469 135 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 CAMK1Q14012 370 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF697Q5TEC3 545 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 VWA5B2Q8N398 1253 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ARIH2OSQ8N7S6 290 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 ACOT4Q8N9L9 421 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 OTUB1Q96FW1 271 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 DIRAS2Q96HU8 199 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 SLC38A2Q96QD8 506 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 FERD3LQ96RJ6 166 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 JAM3Q9BX67 310 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 RAB11FIP5Q9BXF6 653 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 C11orf54Q9H0W9 315 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-209ENST00000470026 SYNDIG1Q9H7V2 258 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 SEMA4GQ9NTN9 838 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 SNX7Q9UNH6 387 aa12.82□□□□□ -0.36
BRCA1-209ENST00000470026 MYO10Q9HD67 2058 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 FAM170BA6NMN3 283 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms