RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 SLC7A8Q9UHI5 535 aa11.23□□□□□ -0.61
CTNS-205ENST00000467663 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
CTNS-205ENST00000467663 CYSRT1A8MQ03 144 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 PLOD2O00469 737 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 CTNSO60931 367 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 RDH16O75452 317 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 ERAL1O75616 437 aaKnown RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 AGFG2O95081 481 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 CPSF4O95639 269 aaKnown RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 GPR75O95800 540 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 C6orf47O95873 294 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 ATP1B1P05026 303 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 CELA2AP08217 269 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 ITGAMP11215 1152 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 PORP16435 677 aaPredicted RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 HBA1P69905 142 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 PRR5P85299 388 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 MPEG1Q2M385 716 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 EIF2S3LQ2VIR3 472 aaKnown RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 MINDY4Q4G0A6 757 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 MTX3Q5HYI7 312 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 C1orf146Q5VVC0 180 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 C18orf63Q68DL7 685 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 ANKRD26P1Q6NSI1 321 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 RPUSD3Q6P087 351 aaKnown RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 LANCL3Q6ZV70 420 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 CPEB2Q7Z5Q1 589 aaKnown RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 RP1L1Q8IWN7 2480 aaPredicted RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 SLC30A8Q8IWU4 369 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 LRRC25Q8N386 305 aaPredicted RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 FAM13CQ8NE31 585 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 PLPP5Q8NEB5 264 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 CATSPER1Q8NEC5 780 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 ZFP90Q8TF47 636 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 HAS2Q92819 552 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 EXOSC8Q96B26 276 aaKnown RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 TBC1D20Q96BZ9 403 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 ZNF681Q96N22 645 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 AMDHD1Q96NU7 426 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 CPPED1Q9BRF8 314 aaPredicted RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 INPP5KQ9BT40 448 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 KAT8Q9H7Z6 458 aaKnown RBP11.22□□□□□ -0.61
CTNS-205ENST00000467663 TPT1P8Q9HAU6 139 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 AGPAT4Q9NRZ5 378 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 LANCL2Q9NS86 450 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 CMTM6Q9NX76 183 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 SLC25A37Q9NYZ2 338 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 SLAMF8Q9P0V8 285 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 PTGFRNQ9P2B2 879 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 POMPQ9Y244 141 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 DOPEY2Q9Y3R5 2298 aa11.22□□□□□ -0.61
CTNS-205ENST00000467663 SCN2AQ99250 2005 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 PRORSD1PA6NEY8 169 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 OR2W5A6NFC9 320 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 FAM220BPB1ANY3 271 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 NME4O00746 187 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 PGRMC2O15173 223 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 SEMA7AO75326 666 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 BCAS2O75934 225 aaPredicted RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 SLC35E2P0CK97 266 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 GP1BBP13224 206 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 GPC1P35052 558 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 XKP51811 444 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 NCBP2P52298 156 aaKnown RBP eCLIP11.21□□□□□ -0.61
CTNS-205ENST00000467663 ACTR3P61158 418 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 ELF3P78545 371 aaPredicted RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 IGLV3-21P80748 117 aaPredicted RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 RHAGQ02094 409 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 LIPEQ05469 1076 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 RBBP4Q09028 425 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 CEACAM7Q14002 265 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 CAPRIN1Q14444 709 aaKnown RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 MFSD4BQ5TF39 518 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 PLAG1Q6DJT9 500 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 AAGABQ6PD74 315 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 ANKRD46Q86W74 232 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 CLECL1Q8IZS7 167 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 METTL25Q8N6Q8 603 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 SIRT6Q8N6T7 355 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 AMER2Q8N7J2 671 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 OR5T3Q8NGG3 340 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 OR56A1Q8NGH5 318 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 OR52E4Q8NGH9 312 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 OR52N2Q8NGI0 321 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 ZNF675Q8TD23 568 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 CIDECQ96AQ7 238 aaPredicted RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 NEURL3Q96EH8 262 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 FAM120BQ96EK7 910 aaKnown RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 CNRIP1Q96F85 164 aaPredicted RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 PEX11GQ96HA9 241 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 KCTD14Q9BQ13 255 aaPredicted RBP11.21□□□□□ -0.61
CTNS-205ENST00000467663 SLC35A5Q9BS91 424 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 RNF32Q9H0A6 362 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 GLIPR2Q9H4G4 154 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 NTMQ9P121 344 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 ACTR3BQ9P1U1 418 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 MAGEL2Q9UJ55 1249 aa11.21□□□□□ -0.61
CTNS-205ENST00000467663 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms