RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 VPS26BQ4G0F5 336 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 TMEM64Q6YI46 380 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 MTDHQ86UE4 582 aaKnown RBP16.17■□□□□ 0.18
CPSF4-209ENST00000465132 SLC5A8Q8N695 610 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 SIRT6Q8N6T7 355 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 OR56A1Q8NGH5 318 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 OR4A15Q8NGL6 344 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 PSMA8Q8TAA3 256 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 SFXN5Q8TD22 340 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 NR4A3Q92570 626 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 UCN3Q969E3 161 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 CIDECQ96AQ7 238 aaPredicted RBP16.17■□□□□ 0.18
CPSF4-209ENST00000465132 CCDC115Q96NT0 180 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 PANX1Q96RD7 426 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 DEFB126Q9BYW3 111 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 ZNF385DQ9H6B1 395 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 MAT2BQ9NZL9 334 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 LEF1Q9UJU2 399 aaPredicted RBP16.17■□□□□ 0.18
CPSF4-209ENST00000465132 NDUFAF1Q9Y375 327 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 ABCA12Q86UK0 2595 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 A0A1W2PP18 115 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 NR5A2O00482 541 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 FCHO1O14526 889 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 RFXANKO14593 260 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 EMC8O43402 210 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 CELA2AP08217 269 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 TP53BP2Q13625 1128 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 MMEL1Q495T6 779 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 TIGD2Q4W5G0 525 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 ZNF628Q5EBL2 1059 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 COQ5Q5HYK3 327 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 SP5Q6BEB4 398 aaPredicted RBP16.16■□□□□ 0.18
CPSF4-209ENST00000465132 LGI4Q8N135 537 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 PCYOX1LQ8NBM8 494 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 NFAM1Q8NET5 270 aaPredicted RBP16.16■□□□□ 0.18
CPSF4-209ENST00000465132 OR9A2Q8NGT5 310 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 RP9Q8TA86 221 aaKnown RBP16.16■□□□□ 0.18
CPSF4-209ENST00000465132 SUN3Q8TAQ9 357 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 CTHRC1Q96CG8 243 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 ELP4Q96EB1 424 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 NMUR2Q9GZQ4 415 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 BCAP29Q9UHQ4 241 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 ERVK-19Q9WJR5 959 aa16.16■□□□□ 0.18
CPSF4-209ENST00000465132 SVILO95425 2214 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 ZGRF1Q86YA3 2104 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 IGHV3-20A0A0C4DH32 117 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 PRSS44E7EML9 344 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 WDPCPO95876 746 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 F10P00742 488 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 NPPAP01160 153 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 UQCRC2P22695 453 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 MAGEA8P43361 318 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 MNAT1P51948 309 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 EFNA3P52797 238 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 KLF10Q13118 480 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 CYLC2Q14093 348 aaPredicted RBP16.15■□□□□ 0.18
CPSF4-209ENST00000465132 ZNF385BQ569K4 471 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 ZCCHC12Q6PEW1 402 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 ZNF551Q7Z340 670 aaPredicted RBP16.15■□□□□ 0.18
CPSF4-209ENST00000465132 SHISA5Q8N114 240 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 OR2L13Q8N349 312 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 GOT1L1Q8NHS2 421 aaPredicted RBP16.15■□□□□ 0.18
CPSF4-209ENST00000465132 ELP5Q8TE02 316 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 NCLNQ969V3 563 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 TEX37Q96LM6 180 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.15■□□□□ 0.18
CPSF4-209ENST00000465132 OR10A5Q9H207 317 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 RAD21L1Q9H4I0 556 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 C19orf53Q9UNZ5 99 aaPredicted RBP16.15■□□□□ 0.18
CPSF4-209ENST00000465132 PCDHGB3Q9Y5G1 929 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 SNX8Q9Y5X2 465 aa16.15■□□□□ 0.18
CPSF4-209ENST00000465132 MYOCOSA0A1B0GUC4 107 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ERN1O75460 977 aaKnown RBP16.14■□□□□ 0.17
CPSF4-209ENST00000465132 KCNH1O95259 989 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 CPSF4O95639 269 aaKnown RBP16.14■□□□□ 0.17
CPSF4-209ENST00000465132 KRT75O95678 551 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 C6orf47O95873 294 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 IGKV3-11P04433 115 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ZCCHC18P0CG32 403 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ITGAMP11215 1152 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 PPIBP23284 216 aaKnown RBP16.14■□□□□ 0.17
CPSF4-209ENST00000465132 IL12AP29459 219 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 PRDX6P30041 224 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 CCT3P49368 545 aaKnown RBP16.14■□□□□ 0.17
CPSF4-209ENST00000465132 PRIM2P49643 509 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 DGKQP52824 942 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF750Q32MQ0 723 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 C6orf10Q5SRN2 563 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 TMEM107Q6UX40 140 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 GFRALQ6UXV0 394 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 C17orf47Q8NEP4 570 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ADCY4Q8NFM4 1077 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 OR9I1Q8NGQ6 314 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 NUBPLQ8TB37 319 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF721Q8TF20 911 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 TP53INP1Q96A56 240 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF354BQ96LW1 612 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 MS4A4EQ96PG1 132 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 RNF32Q9H0A6 362 aa16.14■□□□□ 0.17
CPSF4-209ENST00000465132 ZCCHC3Q9NUD5 404 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms