RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 ADCY4Q8NFM4 1077 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 OR4K14Q8NGD5 310 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 NCLNQ969V3 563 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 METTL2AQ96IZ6 378 aaKnown RBP13.55□□□□□ -0.24
NCK1-202ENST00000460960 DGAT2Q96PD7 388 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 EBF4Q9BQW3 602 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 FAIM2Q9BWQ8 316 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 DNAJB12Q9NXW2 375 aaKnown RBP13.55□□□□□ -0.24
NCK1-202ENST00000460960 UTS2RQ9UKP6 389 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 ZNF407Q9C0G0 2248 aa13.55□□□□□ -0.24
NCK1-202ENST00000460960 PHF3Q92576 2039 aaKnown RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 TRBV11-1A0A0K0K1C0 115 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 NPIPA2E9PIF3 369 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 NPIPA3F8WFD2 350 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 EDF1O60869 148 aaKnown RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 NME6O75414 186 aaPredicted RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 HOXD4P09016 255 aaPredicted RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 CPMP14384 443 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 PLGLB1Q02325 96 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 EMX2Q04743 252 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 MGAT2Q10469 447 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 SF3A3Q12874 501 aaKnown RBP eCLIP13.54□□□□□ -0.24
NCK1-202ENST00000460960 CGB2Q6NT52 195 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 FAM111BQ6SJ93 734 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 C16orf47Q6ZP98 133 aaPredicted RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 ST13P4Q8IZP2 240 aaPredicted RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 OR7A2PQ8NGA2 310 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 OR52N2Q8NGI0 321 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 OR5M9Q8NGP3 310 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 RFWD2Q8NHY2 731 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 SLC2A12Q8TD20 617 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 ZNF721Q8TF20 911 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 CIDECQ96AQ7 238 aaPredicted RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 OR8D2Q9GZM6 311 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 ANKRA2Q9H9E1 313 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 LIN28AQ9H9Z2 209 aaKnown RBP13.54□□□□□ -0.24
NCK1-202ENST00000460960 TMED5Q9Y3A6 229 aa13.54□□□□□ -0.24
NCK1-202ENST00000460960 ACANP16112 2415 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 TMEM200CA6NKL6 621 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 FAM166BA8MTA8 275 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 C9JVG2 144 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 CDK2AP1O14519 115 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 OR10H2O60403 315 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 SLC35E2P0CK97 266 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 PORP16435 677 aaPredicted RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 LBPP18428 481 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 TNNI3P19429 210 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 SSTR4P31391 388 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 TRHRP34981 398 aaPredicted RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 MDH1P40925 334 aaKnown RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 IDH3AP50213 366 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 NME5P56597 212 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 ERVK-8P63133 956 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 PLIN5Q00G26 463 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 DUSP8Q13202 625 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 PDE7AQ13946 482 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 ZNF267Q14586 743 aaPredicted RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 HEPACAMQ14CZ8 416 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 PAOXQ6QHF9 649 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 EPGNQ6UW88 154 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 ACAD11Q709F0 780 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 ARFGAP2Q8N6H7 521 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 B3GNT7Q8NFL0 401 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 SENP5Q96HI0 755 aaPredicted RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 TEX37Q96LM6 180 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 FOXC2Q99958 501 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 POLDIP3Q9BY77 421 aaKnown RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 TRIM45Q9H8W5 580 aaPredicted RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 CXorf21Q9HAI6 301 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 SLC24A3Q9HC58 644 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 SLC35C2Q9NQQ7 365 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 PPIEQ9UNP9 301 aaKnown RBP13.53□□□□□ -0.24
NCK1-202ENST00000460960 ERVK-11Q9UQG0 969 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 ERVK-19Q9WJR5 959 aa13.53□□□□□ -0.24
NCK1-202ENST00000460960 NUP214P35658 2090 aaPredicted RBP13.52□□□□□ -0.24
NCK1-202ENST00000460960 NIPBLQ6KC79 2804 aaeCLIP13.52□□□□□ -0.24
NCK1-202ENST00000460960 TRPC5OSA6NMA1 111 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 ANKRD28O15084 1053 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 ITGA10O75578 1167 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 IGKV3-11P04433 115 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 S1PR1P21453 382 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 NR0B1P51843 470 aaKnown RBP13.52□□□□□ -0.25
NCK1-202ENST00000460960 MRPS35P82673 323 aaKnown RBP13.52□□□□□ -0.25
NCK1-202ENST00000460960 EXOSC7Q15024 291 aaKnown RBP13.52□□□□□ -0.25
NCK1-202ENST00000460960 TERF2Q15554 542 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 LSM12Q3MHD2 195 aaKnown RBP13.52□□□□□ -0.25
NCK1-202ENST00000460960 NXNQ6DKJ4 435 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 OGFOD2Q6N063 350 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 ZNF585AQ6P3V2 769 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 IKBIPQ70UQ0 350 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 MDGA2Q7Z553 956 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 ZZZ3Q8IYH5 903 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 CCDC116Q8IYX3 515 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 KIRREL3Q8IZU9 778 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 OR9A2Q8NGT5 310 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms