RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 SACM1LQ9NTJ5 587 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 TMEM45AQ9NWC5 275 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 WBP11Q9Y2W2 641 aaKnown RBP16.39■□□□□ 0.21
COPS7A-202ENST00000455113 A0A1W2PS29 197 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 ACOT7O00154 380 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 ZFP36L2P47974 494 aaKnown RBP16.39■□□□□ 0.21
COPS7A-202ENST00000455113 CLNS1AP54105 237 aaKnown RBP16.39■□□□□ 0.21
COPS7A-202ENST00000455113 C21orf58P58505 322 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 PLGLB1Q02325 96 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 FUT7Q11130 342 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 EBPQ15125 230 aaKnown RBP16.39■□□□□ 0.21
COPS7A-202ENST00000455113 ZNF750Q32MQ0 723 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 GK5Q6ZS86 529 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 MMP21Q8N119 569 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 GHDCQ8N2G8 530 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 ZBTB18Q99592 522 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 TSPAN10Q9H1Z9 355 aaPredicted RBP16.39■□□□□ 0.21
COPS7A-202ENST00000455113 BCAP29Q9UHQ4 241 aa16.39■□□□□ 0.21
COPS7A-202ENST00000455113 ERRFI1Q9UJM3 462 aaPredicted RBP16.39■□□□□ 0.21
COPS7A-202ENST00000455113 EXO1Q9UQ84 846 aaKnown RBP16.39■□□□□ 0.21
COPS7A-202ENST00000455113 LOC100653049A0A140TA62 436 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 FAM234BA2RU67 622 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 LRRTM2O43300 516 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 KRT34O76011 436 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 STSP08842 583 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 TMED10P49755 219 aaKnown RBP16.38■□□□□ 0.21
COPS7A-202ENST00000455113 POLR2JP52435 117 aaKnown RBP16.38■□□□□ 0.21
COPS7A-202ENST00000455113 BLOC1S3Q6QNY0 202 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 GLB1L3Q8NCI6 653 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-202ENST00000455113 TP53INP1Q96A56 240 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 EXOSC8Q96B26 276 aaKnown RBP16.38■□□□□ 0.21
COPS7A-202ENST00000455113 SPACA9Q96E40 222 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-202ENST00000455113 ARL8BQ9NVJ2 186 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 EHD3Q9NZN3 535 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 DOPEY2Q9Y3R5 2298 aa16.38■□□□□ 0.21
COPS7A-202ENST00000455113 TRGV8A0A0C4DH27 118 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 NR5A2O00482 541 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 SCAMP2O15127 329 aaKnown RBP16.37■□□□□ 0.21
COPS7A-202ENST00000455113 ASNA1O43681 348 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 BCAS2O75934 225 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-202ENST00000455113 UBOX5O94941 541 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 CT62P0C5K7 136 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 CNR1P21554 472 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 MPIP34949 423 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 HPCAL1P37235 193 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 NR0B1P51843 470 aaKnown RBP16.37■□□□□ 0.21
COPS7A-202ENST00000455113 MAP4K2Q12851 820 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 RCAN2Q14206 197 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 KRT72Q14CN4 511 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 PRICKLE4Q2TBC4 344 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 SLC22A10Q63ZE4 541 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 BNC2Q6ZN30 1099 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-202ENST00000455113 SNX32Q86XE0 403 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 CCDC116Q8IYX3 515 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 POU5F2Q8N7G0 328 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 ZFP62Q8NB50 900 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-202ENST00000455113 FAM13CQ8NE31 585 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 TESCQ96BS2 214 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 CNRIP1Q96F85 164 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-202ENST00000455113 FAM173AQ9BQD7 235 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 REEP4Q9H6H4 257 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 MAPRE3Q9UPY8 281 aa16.37■□□□□ 0.21
COPS7A-202ENST00000455113 COX4I1P13073 169 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 DDCP20711 480 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 MAPRE2Q15555 327 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 FAM174BQ3ZCQ3 159 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 SPANXN4Q5MJ08 99 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 ANKRD26P1Q6NSI1 321 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 FAM180BQ6P0A1 224 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 FJX1Q86VR8 437 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 ADCY4Q8NFM4 1077 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 OR7A2PQ8NGA2 310 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 C16orf52Q8NHV5 167 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 RP9Q8TA86 221 aaKnown RBP16.36■□□□□ 0.21
COPS7A-202ENST00000455113 BBS4Q96RK4 519 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 SLC35C2Q9NQQ7 365 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 PRODH2Q9UF12 536 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 ATP6V1HQ9UI12 483 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 POLEQ07864 2286 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 TP53I11O14683 189 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 SLC19A2O60779 497 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 SNRPB2P08579 225 aaKnown RBP16.36■□□□□ 0.21
COPS7A-202ENST00000455113 ABOP16442 354 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 CAPN3P20807 821 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 PRDX6P30041 224 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 RPL3P39023 403 aaKnown RBP16.36■□□□□ 0.21
COPS7A-202ENST00000455113 RFC3P40938 356 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 DGKQP52824 942 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 RPP38P78345 283 aaKnown RBP16.36■□□□□ 0.21
COPS7A-202ENST00000455113 PDE7AQ13946 482 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 CYLC2Q14093 348 aaPredicted RBP16.36■□□□□ 0.21
COPS7A-202ENST00000455113 PGS1Q32NB8 556 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 VPS26BQ4G0F5 336 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 C1QL3Q5VWW1 255 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 R3HCC1LQ7Z5L2 792 aaKnown RBP16.36■□□□□ 0.21
COPS7A-202ENST00000455113 SLC22A16Q86VW1 577 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 TICAM1Q8IUC6 712 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 ZNF615Q8N8J6 731 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 C17orf47Q8NEP4 570 aa16.36■□□□□ 0.21
COPS7A-202ENST00000455113 OR2M7Q8NG81 312 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms