RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 C9orf43Q8TAL5 461 aaPredicted RBP22.24■■□□□ 1.15
CPSF4-207ENST00000451876 BCAS4Q8TDM0 211 aa22.24■■□□□ 1.15
CPSF4-207ENST00000451876 LMF1Q96S06 567 aa22.24■■□□□ 1.15
CPSF4-207ENST00000451876 SLC35A5Q9BS91 424 aa22.24■■□□□ 1.15
CPSF4-207ENST00000451876 YIPF4Q9BSR8 244 aa22.24■■□□□ 1.15
CPSF4-207ENST00000451876 EPS8L2Q9H6S3 715 aa22.24■■□□□ 1.15
CPSF4-207ENST00000451876 YARS2Q9Y2Z4 477 aaKnown RBP22.24■■□□□ 1.15
CPSF4-207ENST00000451876 DYTNA2CJ06 578 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 SLC22A2O15244 555 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 HOXB9P17482 250 aaPredicted RBP22.23■■□□□ 1.15
CPSF4-207ENST00000451876 UQCRC2P22695 453 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 PPICP45877 212 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 RPS26P62854 115 aaKnown RBP22.23■■□□□ 1.15
CPSF4-207ENST00000451876 TSPEARQ8WU66 669 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 TP53INP1Q96A56 240 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 MOAP1Q96BY2 351 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 LCORQ96JN0 433 aaPredicted RBP22.23■■□□□ 1.15
CPSF4-207ENST00000451876 PAIP1Q9H074 479 aaKnown RBP22.23■■□□□ 1.15
CPSF4-207ENST00000451876 VPS4AQ9UN37 437 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 NDUFAF1Q9Y375 327 aa22.23■■□□□ 1.15
CPSF4-207ENST00000451876 TLN1Q9Y490 2541 aaKnown RBP22.23■■□□□ 1.15
CPSF4-207ENST00000451876 ZFYVE26Q68DK2 2539 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 LOC100653049A0A140TA62 436 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 FBP2O00757 339 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 NDUFAB1O14561 156 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 KRT34O76011 436 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 SOX3P41225 446 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 MAP3K8P41279 467 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 PIGGQ5H8A4 983 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 SNX32Q86XE0 403 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 PRR22Q8IZ63 422 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 ANKS4BQ8N8V4 417 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 SLC16A11Q8NCK7 471 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 HOXB13Q92826 284 aaPredicted RBP22.22■■□□□ 1.15
CPSF4-207ENST00000451876 LMF2Q9BU23 707 aaKnown RBP22.22■■□□□ 1.15
CPSF4-207ENST00000451876 SERHL2Q9H4I8 314 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 EML6Q6ZMW3 1958 aa22.22■■□□□ 1.15
CPSF4-207ENST00000451876 FRG2CA6NGY1 282 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 ANGPT2O15123 496 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 OR6B1O95007 311 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 ANP32DO95626 131 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 ACP2P11117 423 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 DRD5P21918 477 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 SSR4P51571 173 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 CASP9P55211 416 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 TUBA3CQ13748 450 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 EXOSC6Q5RKV6 272 aaKnown RBP22.21■■□□□ 1.15
CPSF4-207ENST00000451876 SAXO2Q658L1 398 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 TUBA3EQ6PEY2 450 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 LYPD8Q6UX82 237 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 IGFL3Q6UXB1 125 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 C6orf120Q7Z4R8 191 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 POU5F2Q8N7G0 328 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 CDRT4Q8N9R6 151 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 OR4N2Q8NGD1 307 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 JADE3Q92613 823 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 AURKBQ96GD4 344 aaPredicted RBP22.21■■□□□ 1.15
CPSF4-207ENST00000451876 PHF12Q96QT6 1004 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 SLC25A37Q9NYZ2 338 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 LEF1Q9UJU2 399 aaPredicted RBP22.21■■□□□ 1.15
CPSF4-207ENST00000451876 ZNF451Q9Y4E5 1061 aa22.21■■□□□ 1.15
CPSF4-207ENST00000451876 CD96P40200 585 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 TRPC1P48995 793 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 DCAF7P61962 342 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 LACTB2Q53H82 288 aaPredicted RBP22.2■■□□□ 1.15
CPSF4-207ENST00000451876 LRIF1Q5T3J3 769 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 ASB18Q6ZVZ8 466 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 MTERF4Q7Z6M4 381 aaKnown RBP22.2■■□□□ 1.15
CPSF4-207ENST00000451876 SLC44A2Q8IWA5 706 aaPredicted RBP22.2■■□□□ 1.15
CPSF4-207ENST00000451876 TMEM156Q8N614 296 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 TRIML2Q8N7C3 387 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 CCDC197Q8NCU1 140 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 SLC22A8Q8TCC7 542 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 ASB15Q8WXK1 588 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 SLC9A6Q92581 669 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 RNF32Q9H0A6 362 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 ABI3Q9P2A4 366 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 PCDHB14Q9Y5E9 798 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 PCDHGB7Q9Y5F8 929 aa22.2■■□□□ 1.15
CPSF4-207ENST00000451876 A0A096LPI6 279 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 ZCCHC18P0CG32 403 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 ABCD3P28288 659 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 TRHRP34981 398 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-207ENST00000451876 CHI3L1P36222 383 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-207ENST00000451876 ARG2P78540 354 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 MAPRE2Q15555 327 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 DUSP5Q16690 384 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 BHLHB9Q6PI77 547 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 ZNF227Q86WZ6 799 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 MSRB3Q8IXL7 192 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 OR5D16Q8NGK9 328 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 PNPT1Q8TCS8 783 aaKnown RBP22.2■■□□□ 1.14
CPSF4-207ENST00000451876 ZFP90Q8TF47 636 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 PIK3R3Q92569 461 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 HAS2Q92819 552 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 NEURL3Q96EH8 262 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 SLC35G5Q96KT7 338 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 SIGLEC12Q96PQ1 595 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 LRRC37BQ96QE4 947 aa22.2■■□□□ 1.14
CPSF4-207ENST00000451876 VAPAQ9P0L0 249 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms