RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 NLKQ9UBE8 527 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 IL20RAQ9UHF4 553 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 GPSM3Q9Y4H4 160 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 HEATR5BQ9P2D3 2071 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 IGKV1-8A0A0C4DH67 115 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 C2orf92A0A1B0GVN3 265 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 NDUFS4O43181 175 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 UBXN7O94888 489 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 SLC2A10O95528 541 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 ERGP11308 486 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 PSKH1P11801 424 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 MYL12AP19105 171 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 BUD31P41223 144 aaPredicted RBP12.85□□□□□ -0.35
POLR1B-209ENST00000448770 MTNR1AP48039 350 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 SNRPD2P62316 118 aaKnown RBP12.85□□□□□ -0.35
POLR1B-209ENST00000448770 CHRNEQ04844 493 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 QPRTQ15274 297 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 TYW3Q6IPR3 259 aaKnown RBP12.85□□□□□ -0.35
POLR1B-209ENST00000448770 MRGPREQ86SM8 312 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 Q8N402 240 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 ZNF557Q8N988 423 aaPredicted RBP12.85□□□□□ -0.35
POLR1B-209ENST00000448770 LINC01555Q8NAE3 123 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 ANKK1Q8NFD2 765 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 ENKURQ8TC29 256 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 ZFPM2Q8WW38 1151 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
POLR1B-209ENST00000448770 FAM46AQ96IP4 442 aaKnown RBP12.85□□□□□ -0.35
POLR1B-209ENST00000448770 PRRC1Q96M27 445 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 DPH7Q9BTV6 452 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 TMEM245Q9H330 911 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 KLHL31Q9H511 634 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 SLA2Q9H6Q3 261 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 ZDHHC4Q9NPG8 344 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 SEMA4GQ9NTN9 838 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 MYO7AQ13402 2215 aa12.85□□□□□ -0.35
POLR1B-209ENST00000448770 LOC102723532A0A0G2JNH3 316 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 NOTOA8MTQ0 251 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 HRO43593 1189 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 PLOD3O60568 738 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 FGF18O76093 207 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 NR2F6P10588 404 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 LAG3P18627 525 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 GABRA5P31644 462 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 TRHRP34981 398 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 CTBP2P56545 445 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 REEP5Q00765 189 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 RAB40BQ12829 278 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 COX10Q12887 443 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 LASP1Q14847 261 aaKnown RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 MINDY4Q4G0A6 757 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 LAMTOR1Q6IAA8 161 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 SLC30A6Q6NXT4 461 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 DTX3Q8N9I9 347 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 C17orf50Q8WW18 174 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 TFGQ92734 400 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 UFD1Q92890 307 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 C17orf62Q9BQA9 187 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 TBC1D17Q9HA65 648 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 A0A0A6YYD5 115 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 CD8B2A6NJW9 211 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 KDM4EB2RXH2 506 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 PRRT4C9JH25 899 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 SLC30A4O14863 429 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 CASKO14936 926 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 ZIC2O95409 532 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 THY1P04216 161 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 CD8BP10966 210 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 SLC2A2P11168 524 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 CHRNB1P11230 501 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 ACADMP11310 421 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 FGF9P31371 208 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 SLC1A3P43003 542 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 SMSP52788 366 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 FAPQ12884 760 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 EOGTQ5NDL2 527 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 NDUFAF5Q5TEU4 345 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 LCN1P1Q5VSP4 162 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 SLC36A4Q6YBV0 504 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 TRILQ7L0X0 811 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 VRK2Q86Y07 508 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 KIAA1143Q96AT1 154 aaPredicted RBP12.84□□□□□ -0.35
POLR1B-209ENST00000448770 RAD51AP1Q96B01 352 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 LGR4Q9BXB1 951 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 WASH6PQ9NQA3 447 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 AHSPQ9NZD4 102 aa12.84□□□□□ -0.35
POLR1B-209ENST00000448770 FAM170BA6NMN3 283 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 PGRMC2O15173 223 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 OR1F1O43749 312 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 LINC00271P0C7V0 271 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 C8orf89P0DMQ9 161 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 TFPIP10646 304 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 GNSP15586 552 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 CPN2P22792 545 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 HLA-DMAP28067 261 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms