RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 GIMAP2Q9UG22 337 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 BOKQ9UMX3 212 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 UTP20O75691 2785 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 SPTBN1Q01082 2364 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 PCNX1Q96RV3 2341 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 A0A087WV62 115 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 A0A1B0GVC2 190 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 FRG2CA6NGY1 282 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 NPIPA2E9PIF3 369 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 E9PLN8 166 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 NPIPA3F8WFD2 350 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 PLOD2O00469 737 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 TM9SF1O15321 606 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 PEX11AO75192 247 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 ERN1O75460 977 aaKnown RBP11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 LYPLA1O75608 230 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 SNX4O95219 450 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 BCKDHAP12694 445 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 MC3RP41968 323 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 CORO7P57737 925 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 RPP38P78345 283 aaKnown RBP11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 PLCXD2Q0VAA5 305 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 CHI3L2Q15782 390 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF385BQ569K4 471 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 XKR7Q5GH72 579 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 FNDC7Q5VTL7 733 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 TMEM198Q66K66 360 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 CD163Q86VB7 1156 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 CLHC1Q8NHS4 586 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 PPP1R14CQ8TAE6 165 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 HGDQ93099 445 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 TMBIM1Q969X1 311 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 ELP4Q96EB1 424 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 VSTM2LQ96N03 204 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 RILPQ96NA2 401 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 BTBD9Q96Q07 612 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 NODALQ96S42 347 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 DMRTA2Q96SC8 542 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 VKORC1Q9BQB6 163 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 C20orf27Q9GZN8 174 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 REEP4Q9H6H4 257 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 LDAHQ9H6V9 325 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF703Q9H7S9 590 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 FOLH1BQ9HBA9 442 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 TAS2R9Q9NYW1 312 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 C19orf53Q9UNZ5 99 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 TMED5Q9Y3A6 229 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 ACTL7BQ9Y614 415 aa11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 PHF3Q92576 2039 aaKnown RBP11.68□□□□□ -0.54
PRPF40A-203ENST00000448428 UPK1AO00322 258 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 SUSD5O60279 629 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 TBX19O60806 448 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 UGT2B11O75310 529 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 ERLIN1O75477 346 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 SKAP2O75563 359 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 REM1O75628 298 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 ZWINTO95229 277 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 HSPA4LO95757 839 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 SERPINE1P05121 402 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 NTSP30990 170 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 MAN2A2P49641 1150 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 ABCE1P61221 599 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 GXYLT1Q4G148 440 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 C6orf136Q5SQH8 315 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 XKRXQ6PP77 449 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 TMEM107Q6UX40 140 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 NPSR1Q6W5P4 371 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 RPTNQ6XPR3 784 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF551Q7Z340 670 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 SLC44A2Q8IWA5 706 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 SLC34A3Q8N130 599 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF808Q8N4W9 903 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 OR4N2Q8NGD1 307 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 CIDECQ96AQ7 238 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 PPCDCQ96CD2 204 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF764Q96H86 408 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 PPP3R2Q96LZ3 170 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 GNRHR2Q96P88 292 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 STMN4Q9H169 189 aaPredicted RBP11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 ACKR4Q9NPB9 350 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 SH3BP4Q9P0V3 963 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 TNFRSF10DQ9UBN6 386 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 DOPEY1Q5JWR5 2465 aa11.67□□□□□ -0.54
PRPF40A-203ENST00000448428 SPTAN1Q13813 2472 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 TRGV5A0A0B4J1U4 118 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 OR14I1A6ND48 311 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 OR6C70A6NIJ9 312 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 TMEM114B3SHH9 223 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 AQP7O14520 342 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 TSPAN2O60636 221 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 HCN1O60741 890 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 ICOSLGO75144 302 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 SLITRK5O94991 958 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 MYZAPP0CAP1 466 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 BGNP21810 368 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 DCTP40126 519 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 PTGDSP41222 190 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms