RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 ZNF780BQ9Y6R6 833 aa16.74■□□□□ 0.27
CLDN9-201ENST00000445369 TLX2O43763 284 aaPredicted RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 ALPPP05187 535 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 GSTM3P21266 225 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 AK4P27144 223 aaPredicted RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 NDUFS1P28331 727 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 SOX3P41225 446 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 CLDN2P57739 230 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 RPS15AP62244 130 aaKnown RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 CHRNEQ04844 493 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 SHHQ15465 462 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 LTB4RQ15722 352 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 SYT14P1Q58G82 188 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 ACSM5Q6NUN0 579 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 KIF18BQ86Y91 864 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 PROKR2Q8NFJ6 384 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 NT5CQ8TCD5 201 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 NR4A3Q92570 626 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 FCRL4Q96PJ5 515 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 POLMQ9NP87 494 aaPredicted RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 POLE4Q9NR33 117 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 ABCB10Q9NRK6 738 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 ZNF624Q9P2J8 865 aaPredicted RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 LIPT1Q9Y234 373 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 CHST2Q9Y4C5 530 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 A0A087WUU8 490 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 NARSO43776 548 aaKnown RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 HBQ1P09105 142 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 HOXB2P14652 356 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 SOX6P35712 828 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 ETV6P41212 452 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 SNRPNP63162 240 aaKnown RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 SDE2Q6IQ49 451 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 ASPGQ86U10 573 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 VRK2Q86Y07 508 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 PARP16Q8N5Y8 322 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 FLVCR1-AS1Q8TAF5 88 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 KAT2AQ92830 837 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 PLA2G12AQ9BZM1 189 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 QPCTLQ9NXS2 382 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 CALML5Q9NZT1 146 aa16.73■□□□□ 0.27
CLDN9-201ENST00000445369 GPR55Q9Y2T6 319 aaPredicted RBP16.73■□□□□ 0.27
CLDN9-201ENST00000445369 TBX1O43435 398 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ZIC2O95409 532 aaPredicted RBP16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ZNF888P0CJ79 500 aaPredicted RBP16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ACADMP11310 421 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 TAS2R41P59536 307 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 RGS1Q08116 209 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 HYAL1Q12794 435 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 NFATC4Q14934 902 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 TCEA2Q15560 299 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ATAT1Q5SQI0 421 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ENPP7Q6UWV6 458 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 MTSS1LQ765P7 747 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 DGLUCYQ7Z3D6 616 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 CADM3Q8N126 398 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 DIO2Q92813 273 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ZG16BQ96DA0 208 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ZNF582Q96NG8 517 aaPredicted RBP16.72■□□□□ 0.27
CLDN9-201ENST00000445369 ACTRT3Q9BYD9 372 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 SP140LQ9H930 580 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 TESQ9UGI8 421 aaKnown RBP16.72■□□□□ 0.27
CLDN9-201ENST00000445369 PCOLCE2Q9UKZ9 415 aa16.72■□□□□ 0.27
CLDN9-201ENST00000445369 DIMT1Q9UNQ2 313 aaKnown RBP16.72■□□□□ 0.27
CLDN9-201ENST00000445369 SMSP52788 366 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 TNFRSF17Q02223 184 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 CDC20Q12834 499 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 STEAP3Q658P3 488 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 PPP2R2DQ66LE6 453 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 PAQR6Q6TCH4 344 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 GDPGP1Q6ZNW5 385 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 MRGPREQ86SM8 312 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 FANCMQ8IYD8 2048 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 GJD3Q8N144 294 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 OR52I1Q8NGK6 324 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 ITPKCQ96DU7 683 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 LRR1Q96L50 414 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 PRR14Q9BWN1 585 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 TWSG1Q9GZX9 223 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 NKX2-4Q9H2Z4 354 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 C6orf106Q9H6K1 298 aaPredicted RBP16.71■□□□□ 0.27
CLDN9-201ENST00000445369 NDUFB11Q9NX14 153 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 NTMQ9P121 344 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 SCML1Q9UN30 329 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 CA5BQ9Y2D0 317 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 REV3LO60673 3130 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 H0Y8X5 98 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 FRS3O43559 492 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 CYP7B1O75881 506 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 KLF8O95600 359 aaPredicted RBP16.71■□□□□ 0.27
CLDN9-201ENST00000445369 PRKAR1BP31321 381 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 MLLT11Q13015 90 aaPredicted RBP16.71■□□□□ 0.27
CLDN9-201ENST00000445369 TRAM2Q15035 370 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 ATAD3BQ5T9A4 648 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 HEPHL1Q6MZM0 1159 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 FAM111BQ6SJ93 734 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 C16orf62Q7Z3J2 963 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 TRIM69Q86WT6 500 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 CCL4L1Q8NHW4 92 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 GNPDA2Q8TDQ7 276 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms