RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ACTR3BQ9P1U1 418 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ARMCX1Q9P291 453 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 EMCNQ9ULC0 261 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 RNF115Q9Y4L5 304 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 LRP5O75197 1615 aa2.77□□□□□ -1.97
VPS41-207ENST00000439468 ATP8B3O60423 1300 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 DNMBPQ6XZF7 1577 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 RGSL1A5PLK6 1076 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 RNF212BA8MTL3 300 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 H0YL77 283 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 EI24O14681 340 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 RASGRF2O14827 1237 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 LRRTM2O43300 516 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 GOT2P00505 430 aaKnown RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 HSD17B1P14061 328 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 FOLR2P14207 255 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 MATKP42679 507 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 VCPP55072 806 aaKnown RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 GMFBP60983 142 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 NME3Q13232 169 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 PDIA5Q14554 519 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 LTB4RQ15722 352 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 ZSWIM7Q19AV6 140 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 LRIT3Q3SXY7 679 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 IL23RQ5VWK5 629 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 PNCKQ6P2M8 343 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 CWC27Q6UX04 472 aaKnown RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 UNC5DQ6UXZ4 953 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 RBM43Q6ZSC3 357 aaKnown RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 MOB2Q70IA6 237 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 SH2D6Q7Z4S9 175 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 GPBP1Q86WP2 473 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 PHC2Q8IXK0 858 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 ARFGAP2Q8N6H7 521 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 OR52B4Q8NGK2 314 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 OR6T1Q8NGN1 323 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 OR2L2Q8NH16 312 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 WDR36Q8NI36 951 aaKnown RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 DQX1Q8TE96 717 aaKnown RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 SELENOMQ8WWX9 145 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 RASL10AQ92737 203 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 LHX4Q969G2 390 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 CPXM1Q96SM3 734 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 NDUFAF3Q9BU61 184 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 RAB11FIP5Q9BXF6 653 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 FAM124BQ9H5Z6 455 aaPredicted RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 ACTR8Q9H981 624 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 PANK3Q9H999 370 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 LIN28AQ9H9Z2 209 aaKnown RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 ROPN1Q9HAT0 212 aaPredicted RBP2.76□□□□□ -1.97
VPS41-207ENST00000439468 ESM1Q9NQ30 184 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 FAM114A2Q9NRY5 505 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 GDAP2Q9NXN4 497 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 P2RX2Q9UBL9 471 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 FZR1Q9UM11 496 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 SLC9A8Q9Y2E8 581 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 FKBP7Q9Y680 259 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 CUL7Q14999 1698 aa2.76□□□□□ -1.97
VPS41-207ENST00000439468 BICDL2A1A5D9 508 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 WASHC1A8K0Z3 465 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 WASH3PC4AMC7 463 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 SAP18O00422 153 aaKnown RBP2.75□□□□□ -1.97
VPS41-207ENST00000439468 MCF2LO15068 1137 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 ARPC1BO15143 372 aaKnown RBP2.75□□□□□ -1.97
VPS41-207ENST00000439468 CFLARO15519 480 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 LANCL1O43813 399 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 SSX5O60225 188 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 PDE5AO76074 875 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 APBB3O95704 486 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 IGSF6O95976 241 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 CA3P07451 260 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 RALAP11233 206 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 BCL3P20749 454 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 DNAJB1P25685 340 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 SLC7A2P52569 658 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 GSTO1P78417 241 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 ZNF33BQ06732 778 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 SNX1Q13596 522 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 CD226Q15762 336 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 HAGHQ16775 308 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 C17orf58Q2M2W7 97 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 ADPRMQ3LIE5 342 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 C14orf28Q4W4Y0 310 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 TCTEX1D4Q5JR98 221 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 ZNF506Q5JVG8 444 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 ATRAIDQ6UW56 229 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 WASH2PQ6VEQ5 465 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 HIPK1Q86Z02 1210 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 CENPSQ8N2Z9 138 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 COLGALT1Q8NBJ5 622 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 CSNK1G2-AS1Q8NCQ2 148 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 FAM71CQ8NEG0 241 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 DLX4Q92988 240 aaPredicted RBP2.75□□□□□ -1.97
VPS41-207ENST00000439468 TBC1D31Q96DN5 1066 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 TTYH2Q9BSA4 534 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 PUS3Q9BZE2 481 aaKnown RBP2.75□□□□□ -1.97
VPS41-207ENST00000439468 TRIM6Q9C030 488 aaPredicted RBP2.75□□□□□ -1.97
VPS41-207ENST00000439468 CCSER1Q9C0I3 900 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 ATG10Q9H0Y0 220 aa2.75□□□□□ -1.97
VPS41-207ENST00000439468 GPR83Q9NYM4 423 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms