RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 INPP5JQ15735 1006 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 NKAIN1Q4KMZ8 207 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 FAM74A1Q5RGS3 127 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 C9orf64Q5T6V5 341 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 PRAMEF7Q5VXH5 474 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 OR52W1Q6IF63 320 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 RGS7BPQ6MZT1 257 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SLC27A4Q6P1M0 643 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 C12orf54Q6X4T0 127 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 NAPRTQ6XQN6 538 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF517Q6ZMY9 492 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ABI1Q8IZP0 508 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 APCDD1Q8J025 514 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 DNAJC22Q8N4W6 341 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 C1orf216Q8TAB5 229 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 THAP6Q8TBB0 222 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SLC7A13Q8TCU3 470 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GPX8Q8TED1 209 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ACOT12Q8WYK0 555 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SLC41A3Q96GZ6 507 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 LINC00052Q96N35 136 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 DGAT2Q96PD7 388 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 UBL7Q96S82 380 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CMKLR1Q99788 373 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 NUAK2Q9H093 628 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 LDAHQ9H6V9 325 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 PLEKHA1Q9HB21 404 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GPR173Q9NS66 373 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 TAS2R13Q9NYV9 303 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 KANSL3Q9P2N6 904 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 NUFIP1Q9UHK0 495 aaKnown RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ATG4BQ9Y4P1 393 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ADGRL1O94910 1474 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ZFYVE9O95405 1425 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 KIF21BO75037 1637 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ARID1BQ8NFD5 2236 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 A0A0G2JMP0 313 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM72A0PK05 275 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 C2orf78A6NCI8 922 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GPR32O75388 356 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SC5DO75845 299 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 PTTG1O95997 202 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CSF2P04141 144 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MELTFP08582 738 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 NR2F6P10588 404 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CETPP11597 493 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 UGT2B7P16662 529 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 TFE3P19532 575 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MYF6P23409 242 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 RBX1P62877 108 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 FKBP3Q00688 224 aaKnown RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 BAMBIQ13145 260 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 NOGQ13253 232 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GTF2H2Q13888 395 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 KCNMB1Q16558 191 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF630Q2M218 657 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ANKRD55Q3KP44 614 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 COX19Q49B96 90 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 COX20Q5RI15 118 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 TEDDM1Q5T9Z0 273 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 DCAF12L1Q5VU92 463 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GTF2H2CQ6P1K8 395 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ABHD17CQ6PCB6 329 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF782Q6ZMW2 699 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 AHSA2Q719I0 299 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MMP21Q8N119 569 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 DAW1Q8N136 415 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 FAM71CQ8NEG0 241 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GPRC5AQ8NFJ5 357 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SLC35F5Q8WV83 523 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 RORBQ92753 470 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ARRDC3Q96B67 414 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 BPIFA2Q96DR5 249 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ITCHQ96J02 903 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MRGPRX1Q96LB2 322 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 THAP2Q9H0W7 228 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 TMPRSS5Q9H3S3 457 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MYOZ2Q9NPC6 264 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 FOXJ2Q9P0K8 574 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MARCOQ9UEW3 520 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MAGEL2Q9UJ55 1249 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 RASD1Q9Y272 281 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 B3GNT3Q9Y2A9 372 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ABCB11O95342 1321 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MYH11P35749 1972 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SNRNP200O75643 2136 aaKnown RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 FIGNL2A6NMB9 653 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 TGFBR3LH3BV60 316 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 H7C4K7 107 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 RNF225M0QZC1 329 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 PDCD5O14737 125 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CASKO14936 926 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CTDSPLO15194 276 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CREG1O75629 220 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM253P0C7T8 217 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 PGAM1P18669 254 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GABRR2P28476 465 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 HOXA7P31268 230 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ETV4P43268 484 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms