RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 NEK5Q6P3R8 708 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 RFWD3Q6PCD5 774 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 FAM159AQ6UWV7 190 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 GOLGA7Q7Z5G4 137 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ADGRD2Q7Z7M1 963 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 RANBP3LQ86VV4 465 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-208ENST00000427110 HIPK1Q86Z02 1210 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 SLC22A18ASQ8N1D0 253 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 HDDC3Q8N4P3 179 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF491Q8N8L2 437 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 SUMF1Q8NBK3 374 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 CSNK1G2-AS1Q8NCQ2 148 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 OR6T1Q8NGN1 323 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 RHOXF1Q8NHV9 184 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF671Q8TAW3 534 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 TBCKQ8TEA7 893 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 P3H4Q92791 437 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 TMEM186Q96B77 213 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ZBED6CLQ96FA7 236 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-208ENST00000427110 CAPNS2Q96L46 248 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 MCCC1Q96RQ3 725 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-208ENST00000427110 CPXM1Q96SM3 734 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 C19orf43Q9BQ61 176 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 FAM173AQ9BQD7 235 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 NDUFAF3Q9BU61 184 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 GPR174Q9BXC1 333 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ATG10Q9H0Y0 220 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ESM1Q9NQ30 184 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 GDAP2Q9NXN4 497 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 NINJ2Q9NZG7 142 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ARMCX1Q9P291 453 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 RCOR3Q9P2K3 495 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF490Q9ULM2 529 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-208ENST00000427110 FZR1Q9UM11 496 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 CSAG2Q9Y5P2 127 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 TCOF1Q13428 1488 aaKnown RBP1.93□□□□□ -2.1
PTPRC-208ENST00000427110 IFT140Q96RY7 1462 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 MRC2Q9UBG0 1479 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 MYH15Q9Y2K3 1946 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 ATRXP46100 2492 aa1.93□□□□□ -2.1
PTPRC-208ENST00000427110 FAM205AQ6ZU69 1335 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 FHOD3Q2V2M9 1422 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 FGD6Q6ZV73 1430 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 AKNAQ7Z591 1439 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 KIAA0556O60303 1618 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RAPGEF6Q8TEU7 1601 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 TDRD15B5MCY1 1934 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 LRIT2A6NDA9 550 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 MFSD2BA6NFX1 497 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 C11orf98E9PRG8 122 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 LGALS8O00214 317 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ADAM12O43184 909 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 PRPSAP2O60256 369 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 GPRIN2O60269 458 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF253O75346 499 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RHBDL1O75783 438 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 STK17BO94768 372 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 OAS1P00973 400 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 FAM200BP0CF97 657 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ZCCHC18P0CG32 403 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 FOLR2P14207 255 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 GP9P14770 177 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 IL10P22301 178 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 GATA2P23769 480 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RFC2P35250 354 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 SAA4P35542 130 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ELK3P41970 407 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ASMTP46597 345 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RPL34P49207 117 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 CSRP3P50461 194 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 IST1P53990 364 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 VCPP55072 806 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 MTTPP55157 894 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 STARD6P59095 220 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 HERVK_113P63132 956 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ERVK-8P63133 956 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 IL1RL1Q01638 556 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 GABPB1Q06547 395 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 SMC1AQ14683 1233 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 SLC10A1Q14973 349 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ZKSCAN8Q15776 578 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 PARP6Q2NL67 630 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF528Q3MIS6 628 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 SEL1L2Q5TEA6 688 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 TAF3Q5VWG9 929 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 SPINK14Q6IE38 97 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ATRAIDQ6UW56 229 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ISLR2Q6UXK2 745 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ADAMTSL5Q6ZMM2 481 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RBM43Q6ZSC3 357 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 CEACAM19Q7Z692 300 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 AMZ2Q86W34 360 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ELMOD2Q8IZ81 293 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 LYG1Q8N1E2 194 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 MRPL43Q8N983 215 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 OR4F17Q8NGA8 305 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 OR56B1Q8NGI3 324 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 WDR36Q8NI36 951 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RFESDQ8TAC1 157 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 AGAP11Q8TF27 550 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms