RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 GLIPR2Q9H4G4 154 aa16.79■□□□□ 0.28
SMARCAL1-205ENST00000425815 QPCTLQ9NXS2 382 aa16.79■□□□□ 0.28
SMARCAL1-205ENST00000425815 LSM1O15116 133 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 RGS14O43566 566 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 SNX4O95219 450 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 CLDN14O95500 239 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 JUNP05412 331 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 BPGMP07738 259 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 MAN2A2P49641 1150 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 TMED10P49755 219 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 TMEM81Q6P7N7 255 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 FAM9CQ8IZT9 166 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 TMBIM1Q969X1 311 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 AMDHD1Q96NU7 426 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 BBS4Q96RK4 519 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 SLC6A15Q9H2J7 730 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 LDAHQ9H6V9 325 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 FOLH1BQ9HBA9 442 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 GIMAP4Q9NUV9 329 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 ZDHHC2Q9UIJ5 367 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 FAM215AQ9Y5M1 114 aa16.78■□□□□ 0.28
SMARCAL1-205ENST00000425815 CENPEQ02224 2701 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 EML6Q6ZMW3 1958 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 C2orf72A6NCS6 295 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 UPK1AO00322 258 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 PLOD2O00469 737 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 BCKDKO14874 412 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 SDC1P18827 310 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 KIR3DL1P43629 444 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 TRPC1P48995 793 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 NCBP2P52298 156 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 NUP107P57740 925 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 PLCXD2Q0VAA5 305 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 PMPCAQ10713 525 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 TNFAIP8L3Q5GJ75 292 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 TMEM211Q6ICI0 200 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 ZNF585AQ6P3V2 769 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 IKBIPQ70UQ0 350 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 EXOC3L1Q86VI1 746 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 EID3Q8N140 333 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 OR4N2Q8NGD1 307 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 NEIL3Q8TAT5 605 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 TWIST2Q8WVJ9 160 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 GFM2Q969S9 779 aaKnown RBP16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 ZBTB9Q96C00 473 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 SDCCAG3Q96C92 435 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 TMEM41AQ96HV5 264 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 ZNF597Q96LX8 424 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 MIEF1Q9NQG6 463 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 BAIAP2L1Q9UHR4 511 aa16.77■□□□□ 0.28
SMARCAL1-205ENST00000425815 NCOA6Q14686 2063 aaPredicted RBP16.77■□□□□ 0.27
SMARCAL1-205ENST00000425815 GTF3C1Q12789 2109 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 TEX15Q9BXT5 2789 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 A0A087WV62 115 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 PIP5K1BO14986 540 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 HNRNPRO43390 633 aaKnown RBP16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 TSPAN2O60636 221 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 ICOSLGO75144 302 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 ERN1O75460 977 aaKnown RBP16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 PSMG1O95456 288 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 HPNP05981 417 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 PTPN6P29350 595 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 MC3RP41968 323 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 CDK9P50750 372 aaKnown RBP16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 PSG6Q00889 435 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 KRT71Q3SY84 523 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZNF385BQ569K4 471 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 TIGD3Q6B0B8 471 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 ANKRD26P1Q6NSI1 321 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 TMEM107Q6UX40 140 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 PACS2Q86VP3 889 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 MARVELD3Q96A59 401 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 ELP4Q96EB1 424 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 SLC35A4Q96G79 324 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 C3orf30Q96M34 536 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 STMN4Q9H169 189 aaPredicted RBP16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 GALNT9Q9HCQ5 603 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 CHST11Q9NPF2 352 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 GIMAP2Q9UG22 337 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 ACAD8Q9UKU7 415 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 C19orf53Q9UNZ5 99 aaPredicted RBP16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 RNF6Q9Y252 685 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 C15orf41Q9Y2V0 281 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 ITPR2Q14571 2701 aa16.76■□□□□ 0.27
SMARCAL1-205ENST00000425815 OR6C70A6NIJ9 312 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 GNB5O14775 395 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 REM1O75628 298 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 NEFHP12036 1026 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 ACVR2AP27037 513 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 GDF1P27539 372 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 RPP38P78345 283 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 MPP2Q14168 576 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 XKR7Q5GH72 579 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 SH2D4BQ5SQS7 431 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 SLC30A6Q6NXT4 461 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZNF551Q7Z340 670 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 CCDC71Q8IV32 467 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 OR2L13Q8N349 312 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 WDSUB1Q8N9V3 476 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 AGR3Q8TD06 166 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms