RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 SSX1Q16384 188 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 PODNL1Q6PEZ8 512 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 ENPP7Q6UWV6 458 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 ZNF793Q6ZN11 406 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 KRT73Q86Y46 540 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 TSACCQ96A04 125 aaPredicted RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 CEP19Q96LK0 163 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 AMDHD1Q96NU7 426 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 PSD2Q9BQI7 771 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 TEX101Q9BY14 249 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 QRSL1Q9H0R6 528 aaKnown RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 EQTNQ9NQ60 294 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 CCDC59Q9P031 241 aaKnown RBP10.05□□□□□ -0.8
CUX1-205ENST00000425244 FBXW2Q9UKT8 454 aa10.05□□□□□ -0.8
CUX1-205ENST00000425244 CACNA1IQ9P0X4 2223 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 IGKV1-8A0A0C4DH67 115 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 CACNB4O00305 520 aaPredicted RBP10.04□□□□□ -0.8
CUX1-205ENST00000425244 AQP9O43315 295 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 TLX2O43763 284 aaPredicted RBP10.04□□□□□ -0.8
CUX1-205ENST00000425244 GPX5O75715 221 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 APOL3O95236 402 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 MED26O95402 600 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 CHRM5P08912 532 aaPredicted RBP10.04□□□□□ -0.8
CUX1-205ENST00000425244 NTSP30990 170 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 TRIM23P36406 574 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 FZD5Q13467 585 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 LRRC32Q14392 662 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 TIMM50Q3ZCQ8 353 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 ZNF542PQ5EBM4 170 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 AGAP7PQ5VUJ5 663 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 PAQR6Q6TCH4 344 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 CCDC116Q8IYX3 515 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 KLHL6Q8WZ60 621 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 SHDQ96IW2 340 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 PRR14Q9BWN1 585 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 FGF22Q9HCT0 170 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 SLC35C2Q9NQQ7 365 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 WNT16Q9UBV4 365 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 DSPPQ9NZW4 1301 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 TDRD6O60522 2096 aaKnown RBP10.04□□□□□ -0.8
CUX1-205ENST00000425244 PNMA8CA0A1B0GUJ8 204 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 SAGE2PA6NJ88 616 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 TAF4O00268 1085 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 WWP2O00308 870 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 CTDSP2O14595 271 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 PGRMC2O15173 223 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 RGS5O15539 181 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 BCL6P41182 706 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 ZNF91Q05481 1191 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 SLAMF1Q13291 335 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 ILKQ13418 452 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 GPAT3Q53EU6 434 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 SPANXN2Q5MJ10 180 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 SLX4IPQ5VYV7 408 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 IQCHQ86VS3 1027 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 ATCAYQ86WG3 371 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 NATD1Q8N6N6 113 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 CAMK1GQ96NX5 476 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 OPALINQ96PE5 141 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 FAIM2Q9BWQ8 316 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 TSSK6Q9BXA6 273 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 AICDAQ9GZX7 198 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 ANKRA2Q9H9E1 313 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 WBP11Q9Y2W2 641 aaKnown RBP10.04□□□□□ -0.8
CUX1-205ENST00000425244 KLK4Q9Y5K2 254 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 SLCO1B1Q9Y6L6 691 aa10.04□□□□□ -0.8
CUX1-205ENST00000425244 A0A0A6YYD5 115 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 A0A1W2PS29 197 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 LRIT2A6NDA9 550 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CEACAM5P06731 702 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 SPNP16150 400 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 HNRNPA2B1P22626 353 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 MAOBP27338 520 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 RAB28P51157 221 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 RAB8AP61006 207 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 PRDX1Q06830 199 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 ZNF181Q2M3W8 571 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TMEM107Q6UX40 140 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TBC1D19Q8N5T2 526 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 PSD4Q8NDX1 1056 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 OR4K5Q8NGD3 323 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 OR6T1Q8NGN1 323 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 RASSF5Q8WWW0 418 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 C16orf58Q96GQ5 468 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TMEM80Q96HE8 168 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 BMFQ96LC9 184 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 DDX31Q9H8H2 851 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 ACSS1Q9NUB1 689 aaPredicted RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 C14orf119Q9NWQ9 140 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 A4GNTQ9UNA3 340 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CFL2Q9Y281 166 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 SLC9A8Q9Y2E8 581 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 PEX16Q9Y5Y5 336 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 TRBV23OR9-2A0A075B6M9 112 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 C4orf51C9J302 202 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 FRS3O43559 492 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 PRKYO43930 277 aa10.03□□□□□ -0.8
CUX1-205ENST00000425244 CSO75390 466 aaKnown RBP10.03□□□□□ -0.8
CUX1-205ENST00000425244 PDGFBP01127 241 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms