RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 LGI1O95970 557 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 FAM157BP0CG42 384 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 MMP11P24347 488 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 MAPK8P45983 427 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 GAS1P54826 345 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 MAP4K2Q12851 820 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 ELOAQ14241 798 aaKnown RBP13.52□□□□□ -0.24
MSH5-206ENST00000423982 PODNL1Q6PEZ8 512 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 ZER1Q7Z7L7 766 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 TIGD4Q8IY51 512 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 SLC9A6Q92581 669 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 CHFRQ96EP1 664 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 TMED9Q9BVK6 235 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 TBC1D17Q9HA65 648 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 RBFOX1Q9NWB1 397 aaKnown RBP13.52□□□□□ -0.24
MSH5-206ENST00000423982 DIMT1Q9UNQ2 313 aaKnown RBP13.52□□□□□ -0.24
MSH5-206ENST00000423982 MGAT4BQ9UQ53 548 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 C2orf92A0A1B0GVN3 265 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 PRRT4C9JH25 899 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 NME6O75414 186 aaPredicted RBP13.52□□□□□ -0.25
MSH5-206ENST00000423982 NFATC1O95644 943 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 C1QBP02746 253 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 CATP04040 527 aaKnown RBP13.52□□□□□ -0.25
MSH5-206ENST00000423982 EPHX1P07099 455 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 MAPK12P53778 367 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 ZNF33BQ06732 778 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 HSDL2Q6YN16 418 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 SZRD1Q7Z422 152 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 IQCHQ86VS3 1027 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 PCNPQ8WW12 178 aaKnown RBP13.52□□□□□ -0.25
MSH5-206ENST00000423982 MTERF3Q96E29 417 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 PDXPQ96GD0 296 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 QRFPRQ96P65 431 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 ACAT2Q9BWD1 397 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 COQ3Q9NZJ6 369 aa13.52□□□□□ -0.25
MSH5-206ENST00000423982 WASH3PC4AMC7 463 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 ASGR2P07307 311 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 ARSBP15848 533 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 WNT4P56705 351 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 ABATP80404 500 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 BNC1Q01954 994 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 TNK1Q13470 666 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 SNAPC1Q16533 368 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 SYPL1Q16563 259 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 PLK5Q496M5 336 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 SLC30A8Q8IWU4 369 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 BMPERQ8N8U9 685 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 GALNT6Q8NCL4 622 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 C7orf57Q8NEG2 295 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 OR5D16Q8NGK9 328 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 OTUB2Q96DC9 234 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 LMLNQ96KR4 655 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 NLNQ9BYT8 704 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 MKRN2Q9H000 416 aaKnown RBP13.51□□□□□ -0.25
MSH5-206ENST00000423982 CD207Q9UJ71 328 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 KLHL21Q9UJP4 597 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 FBXW2Q9UKT8 454 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 PRAMEF27A3QJZ7 478 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 ARHGEF9O43307 516 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 OCLNQ16625 522 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 WASH2PQ6VEQ5 465 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.51□□□□□ -0.25
MSH5-206ENST00000423982 CXorf40BQ96DE9 158 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 RNFT2Q96EX2 444 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 CDX2Q99626 313 aaPredicted RBP13.51□□□□□ -0.25
MSH5-206ENST00000423982 C19orf43Q9BQ61 176 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 KCNK12Q9HB15 430 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 DEC1Q9P2X7 70 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 SLC25A13Q9UJS0 675 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 A4GNTQ9UNA3 340 aa13.51□□□□□ -0.25
MSH5-206ENST00000423982 MYO10Q9HD67 2058 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 TBC1D3BA6NDS4 549 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 MYL12AP19105 171 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 WASP42768 502 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 GIPRP48546 466 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 RUNX3Q13761 415 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 SPDYE7PQ495Y7 208 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 CLEC12AQ5QGZ9 265 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 ZNF57Q68EA5 555 aaPredicted RBP13.5□□□□□ -0.25
MSH5-206ENST00000423982 QSOX2Q6ZRP7 698 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 ADGRF3Q8IZF5 1079 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 OR4M2Q8NGB6 313 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 METTL2AQ96IZ6 378 aaKnown RBP13.5□□□□□ -0.25
MSH5-206ENST00000423982 IL17FQ96PD4 163 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 ATF6BQ99941 703 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 TRMT61BQ9BVS5 477 aaKnown RBP13.5□□□□□ -0.25
MSH5-206ENST00000423982 SERHL2Q9H4I8 314 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 NARFLQ9H6Q4 476 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 MYNNQ9NPC7 610 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 ZSCAN32Q9NX65 697 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 CD8B2A6NJW9 211 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 FAAHO00519 579 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 SLC30A4O14863 429 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 LANCL1O43813 399 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 CH25HO95992 272 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 CD8BP10966 210 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 PTNP21246 168 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 GJA4P35212 333 aa13.5□□□□□ -0.25
MSH5-206ENST00000423982 RAB8AP61006 207 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms