RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ULK1O75385 1050 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 WDR47O94967 919 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PIGNO95427 931 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 HNRNPLP14866 589 aaKnown RBP eCLIP3.33□□□□□ -1.884e-12■■□□□ 12.1
TOP2A-201ENST00000423485 TCP1P17987 556 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 KRT4P19013 534 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 KLK2P20151 261 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CCNA2P20248 432 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 DRAP1Q14919 205 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 KIF26BQ2KJY2 2108 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 EIPR1Q53HC9 387 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 HSP90AA4PQ58FG1 418 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 METTL11BQ5VVY1 283 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ALG1LQ6GMV1 187 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PNCKQ6P2M8 343 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 C16orf89Q6UX73 402 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 LIPIQ6XZB0 460 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CCDC121Q6ZUS5 278 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CENPVQ7Z7K6 275 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 GLB1L3Q8NCI6 653 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 OR13C3Q8NGS6 347 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 OR10T2Q8NGX3 314 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FEZF2Q8TBJ5 459 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PTPMT1Q8WUK0 201 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 RNASE6Q93091 150 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 RNF25Q96BH1 459 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PGM2Q96G03 612 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 P2RY11Q96G91 374 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 GPER1Q99527 375 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PDCD10Q9BUL8 212 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SSU72Q9NP77 194 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SARDHQ9UL12 918 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 NAALADL1Q9UQQ1 740 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CFAP20Q9Y6A4 193 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SLC43A1O75387 559 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SEC22BO75396 215 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF432O94892 652 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ENPP1P22413 925 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CFL1P23528 166 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CD97P48960 835 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 NDUFA8P51970 172 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 TBPL1P62380 186 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 MC2RQ01718 297 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 GALNT3Q14435 633 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 STXBP5Q5T5C0 1151 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ATG9BQ674R7 924 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 C1orf94Q6P1W5 598 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 USP51Q70EK9 711 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 MILR1Q7Z6M3 343 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF843Q8N446 348 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SCAMP5Q8TAC9 235 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 AENQ8WTP8 325 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FBLIM1Q8WUP2 373 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PIH1D2Q8WWB5 315 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 MFSD3Q96ES6 412 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ADOQ96SZ5 270 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SLITRK2Q9H156 845 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 C1orf198Q9H425 327 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FARSBQ9NSD9 589 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ELOVL5Q9NYP7 299 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 TAS2R9Q9NYW1 312 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 MMACHCQ9Y4U1 282 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CABIN1Q9Y6J0 2220 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 DOCK7Q96N67 2140 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 LILRA5A6NI73 299 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FAM86B1E9PN63 330 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 DNALI1O14645 258 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 TBX1O43435 398 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SUSD5O60279 629 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 STC2O76061 302 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SLITRK3O94933 977 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SEC24AO95486 1093 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FAM86B2P0C5J1 330 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ATP1B2P14415 290 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FOSL1P15407 271 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 USF1P22415 310 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 HSD11B1P28845 292 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CCT3P49368 545 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 MAPK12P53778 367 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 TCEAL1Q15170 157 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 UGT8Q16880 541 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SLC36A3Q495N2 470 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 HBMQ6B0K9 141 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF720Q7Z2F6 126 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ADAMTSL2Q86TH1 951 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 GTSCR1Q86UQ5 136 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 MUC20Q8N307 709 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 RIBC1Q8N443 379 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 LINC00301Q8NCQ3 95 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 POC1BQ8TC44 478 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SPPL2AQ8TCT8 520 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 EME1Q96AY2 570 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 BIRC8Q96P09 236 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ARPC5LQ9BPX5 153 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 B3GNT5Q9BYG0 378 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SEC61A2Q9H9S3 476 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 NLE1Q9NVX2 485 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 C14orf119Q9NWQ9 140 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CACNA1HO95180 2353 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms