RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SERPINB10P48595 397 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 HMGA2P52926 109 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 FUT5Q11128 374 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ELOAQ14241 798 aaKnown RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 GINS1Q14691 196 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 PGBD2Q6P3X8 592 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 NRROSQ86YC3 692 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 OR7G2Q8NG99 324 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 PSMA8Q8TAA3 256 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CDS1Q92903 461 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CLIP3Q96DZ5 547 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 COX4I2Q96KJ9 171 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 Q96MT0 163 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 EGLN3Q9H6Z9 239 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 POLE4Q9NR33 117 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ACTR10Q9NZ32 417 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 A4GNTQ9UNA3 340 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 GPC6Q9Y625 555 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 MUC22E2RYF6 1773 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 CBFA2T3O75081 653 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CDC123O75794 336 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 SEMA4FO95754 770 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ALPPP05187 535 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ADRA2AP08913 450 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CCNYL3P0C7X3 344 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 GABRG2P18507 467 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 MMP11P24347 488 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ACVR2AP27037 513 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 AKT2P31751 481 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 FRKP42685 505 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 ANXA11P50995 505 aaKnown RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 PDX1P52945 283 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 RGS8P57771 180 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 VSX2P58304 361 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 TRA2BP62995 288 aaKnown RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 RUNX2Q13950 521 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 SNAPC1Q16533 368 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 TRMT12Q53H54 448 aaKnown RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 FAAH2Q6GMR7 532 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ZNF425Q6IV72 752 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ZNF730Q6ZMV8 503 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 SHFQ7M4L6 423 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ZER1Q7Z7L7 766 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 PAQR7Q86WK9 346 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 RASSF5Q8WWW0 418 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 RERGQ96A58 199 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 GPA33Q99795 319 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CCDC3Q9BQI4 270 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 TPK1Q9H3S4 243 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 EHD3Q9NZN3 535 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 DAPK2Q9UIK4 370 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 KRBA1A5PL33 1030 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 ZAR1LA6NP61 321 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 B4DGG1 531 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 FAAHO00519 579 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 SULT1C4O75897 302 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 LTBRP36941 435 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 SOX3P41225 446 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 LIMS1P48059 325 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CSNK2BP67870 215 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 MADCAM1Q13477 382 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CCDC85BQ15834 202 aaPredicted RBP10.28□□□□□ -0.76
DDX56-203ENST00000421223 PAQR6Q6TCH4 344 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 TMEM184AQ6ZMB5 413 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 CENPSQ8N2Z9 138 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 OR4K14Q8NGD5 310 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 OR56A1Q8NGH5 318 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 FAM3CQ92520 227 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 OR2A14Q96R47 310 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 SPATA5L1Q9BVQ7 753 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 MIR1-1HGQ9H1L0 117 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 HMG20AQ9NP66 347 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 FTSJ1Q9UET6 329 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 MGAT4BQ9UQ53 548 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 SLCO1B1Q9Y6L6 691 aa10.28□□□□□ -0.76
DDX56-203ENST00000421223 OR2W5A6NFC9 320 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 H0YGG7 62 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 WWP2O00308 870 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 B3GALT2O43825 422 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 EPPINO95925 133 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 ADAP00813 363 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 NDUFS1P28331 727 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 TLX1P31314 330 aaPredicted RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 TGFBR2P37173 567 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 ARF3P61204 181 aaPredicted RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 RPS15AP62244 130 aaKnown RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 SHC2P98077 582 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 SUZ12Q15022 739 aaKnown RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 TRIM16LQ309B1 348 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 MRM1Q6IN84 353 aaKnown RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 ZNF770Q6IQ21 691 aaPredicted RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 CHPT1Q8WUD6 406 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 APOBEC4Q8WW27 367 aaKnown RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 TMEM203Q969S6 136 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 SLC22A18Q96BI1 424 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 SLC35A4Q96G79 324 aa10.27□□□□□ -0.77
DDX56-203ENST00000421223 TOE1Q96GM8 510 aaKnown RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 FAM46AQ96IP4 442 aaKnown RBP10.27□□□□□ -0.77
DDX56-203ENST00000421223 DACH2Q96NX9 599 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms