RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TRILQ7L0X0 811 aa18.9■□□□□ 0.62
PKNOX1-202ENST00000418336 SLC22A16Q86VW1 577 aa18.9■□□□□ 0.62
PKNOX1-202ENST00000418336 CDC26Q8NHZ8 85 aa18.9■□□□□ 0.62
PKNOX1-202ENST00000418336 OMA1Q96E52 524 aa18.9■□□□□ 0.62
PKNOX1-202ENST00000418336 FOLH1BQ9HBA9 442 aa18.9■□□□□ 0.62
PKNOX1-202ENST00000418336 PRODH2Q9UF12 536 aa18.9■□□□□ 0.62
PKNOX1-202ENST00000418336 C19orf53Q9UNZ5 99 aaPredicted RBP18.9■□□□□ 0.62
PKNOX1-202ENST00000418336 CDC40O60508 579 aaKnown RBP eCLIP18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 TSPAN2O60636 221 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 UGT2B11O75310 529 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 SERPINE1P05121 402 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 NCBP2P52298 156 aaKnown RBP eCLIP18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 WDR4P57081 412 aaKnown RBP18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 DCAF7P61962 342 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 PSG6Q00889 435 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 PLGLB1Q02325 96 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 CHI3L2Q15782 390 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 ARHGAP11AQ6P4F7 1023 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 NUDCD3Q8IVD9 361 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 DDIASQ8IXT1 998 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 RPRMLQ8N4K4 120 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 NUDT8Q8WV74 236 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 HOXB13Q92826 284 aaPredicted RBP18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 GFM2Q969S9 779 aaKnown RBP18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 CIDECQ96AQ7 238 aaPredicted RBP18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 ELP4Q96EB1 424 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 SLC35A4Q96G79 324 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 RILPQ96NA2 401 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 TSSK3Q96PN8 268 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 MIEF1Q9NQG6 463 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 PFDN4Q9NQP4 134 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 SPRR3Q9UBC9 169 aa18.89■□□□□ 0.61
PKNOX1-202ENST00000418336 CRYBG3Q68DQ2 2970 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 ATP6AP2A0A1C7CYW4 349 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 E9PLN8 166 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 ACOT7O00154 380 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 ATP6AP2O75787 350 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 SLITRK5O94991 958 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 CHEK2O96017 543 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 ABOP16442 354 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 MAP3K8P41279 467 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 NRG3P56975 720 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 GALNTL6Q49A17 601 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 C6orf136Q5SQH8 315 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 TMEM107Q6UX40 140 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 C3P1Q6ZMU1 363 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 CD163Q86VB7 1156 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 HOMEZQ8IX15 550 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 SLC34A3Q8N130 599 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 ZNF781Q8N8C0 355 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 OR4N2Q8NGD1 307 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 CLHC1Q8NHS4 586 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 PHF10Q8WUB8 498 aaKnown RBP18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 DIO2Q92813 273 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 TLCD1Q96CP7 247 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 BBS4Q96RK4 519 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 VKORC1Q9BQB6 163 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 DOHHQ9BU89 302 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 STMN4Q9H169 189 aaPredicted RBP18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 REEP4Q9H6H4 257 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 ACKR4Q9NPB9 350 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 GIMAP4Q9NUV9 329 aa18.88■□□□□ 0.61
PKNOX1-202ENST00000418336 CELSR2Q9HCU4 2923 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 WDR91A4D1P6 747 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 CAPN14A8MX76 684 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 TMEM114B3SHH9 223 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 AQP7O14520 342 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 TP53I11O14683 189 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 SUSD5O60279 629 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 SKAP2O75563 359 aaPredicted RBP18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 FREM3P0C091 2139 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 TMED10P49755 219 aaKnown RBP18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 ABCE1P61221 599 aaKnown RBP18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 KCNJ2P63252 427 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 PLCXD2Q0VAA5 305 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 TBCELQ5QJ74 424 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 EXOSC6Q5RKV6 272 aaKnown RBP18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 ZNF551Q7Z340 670 aaPredicted RBP18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 NUP54Q7Z3B4 507 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 TMBIM1Q969X1 311 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 TMEM41AQ96HV5 264 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 QPCTLQ9NXS2 382 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 NTMQ9P121 344 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 ATP6V1HQ9UI12 483 aa18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 BOKQ9UMX3 212 aaPredicted RBP18.87■□□□□ 0.61
PKNOX1-202ENST00000418336 AKAP10O43572 662 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 PEX11AO75192 247 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 ERN1O75460 977 aaKnown RBP18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 SNX4O95219 450 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 ZWINTO95229 277 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 GRNP28799 593 aaKnown RBP18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 PTPN6P29350 595 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 RTL6Q6ICC9 239 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 RPTNQ6XPR3 784 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 MRGPRGQ86SM5 289 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 RIMKLAQ8IXN7 391 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 ZNF808Q8N4W9 903 aaPredicted RBP18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 PPP3R2Q96LZ3 170 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 TMBIM4Q9HC24 238 aa18.86■□□□□ 0.61
PKNOX1-202ENST00000418336 PNPLA3Q9NST1 481 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms