RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ABCD3P28288 659 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 MDH1P40925 334 aaKnown RBP21.29■■□□□ 1
SMARCB1-205ENST00000417137 CDK9P50750 372 aaKnown RBP21.29■■□□□ 1
SMARCB1-205ENST00000417137 PRKAG1P54619 331 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 STX1BP61266 288 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 GUCY1A3Q02108 690 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 NTRK2Q16620 822 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 VPS26BQ4G0F5 336 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 TMEM198Q66K66 360 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 OR4F3Q6IEY1 312 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 SZRD1Q7Z422 152 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 FAM13CQ8NE31 585 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 PSMA8Q8TAA3 256 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 GRHL3Q8TE85 626 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 STON2Q8WXE9 905 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 CCDC134Q9H6E4 229 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 ASF1BQ9NVP2 202 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 ZIM2Q9NZV7 527 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 CNIH4Q9P003 139 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 SNX8Q9Y5X2 465 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 TENM4Q6N022 2769 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 VIMP08670 466 aaKnown RBP21.28■■□□□ 1
SMARCB1-205ENST00000417137 TROVE2P10155 538 aaKnown RBP eCLIP21.28■■□□□ 1
SMARCB1-205ENST00000417137 CNR1P21554 472 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 KRT20P35900 424 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 IRX1P78414 480 aaPredicted RBP21.28■■□□□ 1
SMARCB1-205ENST00000417137 PLCXD2Q0VAA5 305 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 NNATQ16517 81 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 SPDYE7PQ495Y7 208 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 PRR30Q53SZ7 412 aaPredicted RBP21.28■■□□□ 1
SMARCB1-205ENST00000417137 ZCCHC12Q6PEW1 402 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 BHLHB9Q6PI77 547 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 TMEM64Q6YI46 380 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.28■■□□□ 1
SMARCB1-205ENST00000417137 SLC44A2Q8IWA5 706 aaPredicted RBP21.28■■□□□ 1
SMARCB1-205ENST00000417137 SULF2Q8IWU5 870 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 SLC34A3Q8N130 599 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 MIER2Q8N344 545 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 POGLUT1Q8NBL1 392 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 FAR1Q8WVX9 515 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 MOAP1Q96BY2 351 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 MS4A4EQ96PG1 132 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 EBF4Q9BQW3 602 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 NPHS2Q9NP85 383 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 SDR39U1Q9NRG7 319 aaPredicted RBP21.28■■□□□ 1
SMARCB1-205ENST00000417137 FAM120CQ9NX05 1096 aaKnown RBP21.28■■□□□ 1
SMARCB1-205ENST00000417137 OR10H1Q9Y4A9 318 aa21.28■■□□□ 1
SMARCB1-205ENST00000417137 ASPDHA6ND91 283 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 PPM1BO75688 479 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 IL6P05231 212 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 ABCB1P08183 1280 aaPredicted RBP21.27■■□□□ 1
SMARCB1-205ENST00000417137 CT45A8P0DMV1 189 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 CT45A9P0DMV2 189 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 CCT3P49368 545 aaKnown RBP21.27■■□□□ 1
SMARCB1-205ENST00000417137 LRRC74AQ0VAA2 488 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 FAM174BQ3ZCQ3 159 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 CT45A2Q5DJT8 189 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 SPANXN4Q5MJ08 99 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 NUP54Q7Z3B4 507 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 ATCAYQ86WG3 371 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 PRR22Q8IZ63 422 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 CDRT4Q8N9R6 151 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 OR56A1Q8NGH5 318 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 PAQR8Q8TEZ7 354 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 MIB2Q96AX9 1013 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 OMA1Q96E52 524 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 MARK4Q96L34 752 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 TEX37Q96LM6 180 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 TAAR6Q96RI8 345 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 SECISBP2Q96T21 854 aaKnown RBP21.27■■□□□ 1
SMARCB1-205ENST00000417137 BARD1Q99728 777 aaKnown RBP21.27■■□□□ 1
SMARCB1-205ENST00000417137 Q9N2J8 555 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 SIRT3Q9NTG7 399 aaPredicted RBP21.27■■□□□ 1
SMARCB1-205ENST00000417137 ZCCHC3Q9NUD5 404 aaKnown RBP21.27■■□□□ 1
SMARCB1-205ENST00000417137 OLAHQ9NV23 265 aa21.27■■□□□ 1
SMARCB1-205ENST00000417137 MRTO4Q9UKD2 239 aaKnown RBP21.27■■□□□ 1
SMARCB1-205ENST00000417137 BSNQ9UPA5 3926 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 ABCB7O75027 752 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 REM1O75628 298 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 PRIM2P49643 509 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 MEOX1P50221 254 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 WNT3P56703 355 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 CORO7P57737 925 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 MRPS22P82650 360 aaKnown RBP21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 PSG6Q00889 435 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 CYP27C1Q4G0S4 372 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 OR10G3Q8NGC4 313 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 OR5M3Q8NGP4 307 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 SFXN5Q8TD22 340 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 FAM120BQ96EK7 910 aaKnown RBP21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 THOC1Q96FV9 657 aaKnown RBP21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 RILPQ96NA2 401 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 FAM173AQ9BQD7 235 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 LMF2Q9BU23 707 aaKnown RBP21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 SH2D2AQ9NP31 389 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 EQTNQ9NQ60 294 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 DCTN4Q9UJW0 460 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 VPS4AQ9UN37 437 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 NTNG1Q9Y2I2 539 aa21.26■□□□□ 0.99
SMARCB1-205ENST00000417137 NME6O75414 186 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms