RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 ZSCAN1Q8NBB4 408 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 BRIX1Q8TDN6 353 aaKnown RBP12.16□□□□□ -0.46
CNOT4-204ENST00000414802 THAP4Q8WY91 577 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 RAB8BQ92930 207 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 TMEM125Q96AQ2 219 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 THOC3Q96J01 351 aaKnown RBP12.16□□□□□ -0.46
CNOT4-204ENST00000414802 LMF1Q96S06 567 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 GPATCH1Q9BRR8 931 aaKnown RBP12.16□□□□□ -0.46
CNOT4-204ENST00000414802 ACTRT3Q9BYD9 372 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 DEFB126Q9BYW3 111 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 PIF1Q9H611 641 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.16□□□□□ -0.46
CNOT4-204ENST00000414802 CMTM6Q9NX76 183 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 PRODH2Q9UF12 536 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 FAF1Q9UNN5 650 aaPredicted RBP12.16□□□□□ -0.46
CNOT4-204ENST00000414802 KCNE3Q9Y6H6 103 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 ZZEF1O43149 2961 aa12.16□□□□□ -0.46
CNOT4-204ENST00000414802 PCNX3Q9H6A9 2034 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 GXYLT2A0PJZ3 443 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 OR6C76A6NM76 312 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 A8MUI8 341 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 MAN1A2O60476 641 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 SERPINA7P05543 415 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 KRT16P08779 473 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 NUDT7P0C024 238 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 OR12D1P0DN82 309 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 SOX11P35716 441 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 PRIM2P49643 509 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 KHKP50053 298 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 MNAT1P51948 309 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 DUSP5Q16690 384 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 HLA-DQA1Q5Y7H0 255 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 TCTN3Q6NUS6 607 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 CDC73Q6P1J9 531 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 BHLHB9Q6PI77 547 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 OLIG3Q7RTU3 272 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 GALNT10Q86SR1 603 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 SLC44A2Q8IWA5 706 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-204ENST00000414802 PRR22Q8IZ63 422 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 DEFB107AQ8IZN7 70 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 CLEC1AQ8NC01 280 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 SLC16A11Q8NCK7 471 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 OR52N2Q8NGI0 321 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 PIK3R3Q92569 461 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 CDS1Q92903 461 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 ADIPOR1Q96A54 375 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 SLC7A6OSQ96CW6 309 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-204ENST00000414802 FER1L6-AS2Q96M78 137 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 OR7D2Q96RA2 312 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 THUMPD3Q9BV44 507 aaKnown RBP12.15□□□□□ -0.46
CNOT4-204ENST00000414802 NXF5Q9H1B4 397 aaKnown RBP12.15□□□□□ -0.46
CNOT4-204ENST00000414802 USP22Q9UPT9 525 aa12.15□□□□□ -0.46
CNOT4-204ENST00000414802 USP24Q9UPU5 2620 aa12.15□□□□□ -0.47
CNOT4-204ENST00000414802 C2orf92A0A1B0GVN3 265 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 TMEM200CA6NKL6 621 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 A6NL46 340 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 WWP2O00308 870 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 NME4O00746 187 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 MAN2A2P49641 1150 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 NR0B1P51843 470 aaKnown RBP12.14□□□□□ -0.47
CNOT4-204ENST00000414802 NCALDP61601 193 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 PSG6Q00889 435 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 AIMP2Q13155 320 aaKnown RBP12.14□□□□□ -0.47
CNOT4-204ENST00000414802 MYBPC3Q14896 1274 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 RGNQ15493 299 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 CRTC2Q53ET0 693 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-204ENST00000414802 B3GNTL1Q67FW5 361 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-204ENST00000414802 C16orf89Q6UX73 402 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 PGAM4Q8N0Y7 254 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 ZNF441Q8N8Z8 693 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 TMEM102Q8N9M5 508 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-204ENST00000414802 CDRT4Q8N9R6 151 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 OR4N2Q8NGD1 307 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 OR8J3Q8NGG0 315 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 OR10A6Q8NH74 314 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 ADAMTS15Q8TE58 950 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 LMF2Q9BU23 707 aaKnown RBP12.14□□□□□ -0.47
CNOT4-204ENST00000414802 ATP13A2Q9NQ11 1180 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 TAS2R1Q9NYW7 299 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 CFL2Q9Y281 166 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 HEATR5AQ86XA9 2040 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 FREM3P0C091 2139 aa12.14□□□□□ -0.47
CNOT4-204ENST00000414802 EVPLLA8MZ36 301 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 HMGN4O00479 90 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 ZNF354AO60765 605 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-204ENST00000414802 ZFAND5O76080 213 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 NPPAP01160 153 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 ALOX5P09917 674 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 CT45A8P0DMV1 189 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 CT45A9P0DMV2 189 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 PPIBP23284 216 aaKnown RBP12.13□□□□□ -0.47
CNOT4-204ENST00000414802 GABRA3P34903 492 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 RFX3P48380 749 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 RRADP55042 308 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 TMPRSS3P57727 454 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 DSTNP60981 165 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 ZNHIT3Q15649 155 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-204ENST00000414802 CT45A2Q5DJT8 189 aa12.13□□□□□ -0.47
CNOT4-204ENST00000414802 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
CNOT4-204ENST00000414802 SLC15A3Q8IY34 581 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms