RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 POLEQ07864 2286 aa18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 UBR5O95071 2799 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-207ENST00000409417 TCP11X1B4DZS4 312 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 PYCARD-AS1I3L0S3 204 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 TP53I11O14683 189 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 P04436 131 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 CCL3P10147 92 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 KIR3DL1P43629 444 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 GPR85P60893 370 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 RPS6KA2Q15349 733 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 DPY19L1Q2PZI1 675 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 ACAD11Q709F0 780 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 CPSF7Q8N684 471 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 POGLUT1Q8NBL1 392 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 C3orf14Q9HBI5 128 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 CNIH4Q9P003 139 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 FLNCQ14315 2725 aa18.27■□□□□ 0.52
PDLIM2-207ENST00000409417 UBDO15205 165 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 PPM1BO75688 479 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 ABCB1P08183 1280 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 CNR1P21554 472 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 IDH3AP50213 366 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 MEOX1P50221 254 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 AQP5P55064 265 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 FBXW4P57775 412 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 PSG6Q00889 435 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 PLCXD2Q0VAA5 305 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 ZNF155Q12901 538 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 TMEM198Q66K66 360 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 NPSR1Q6W5P4 371 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 PRR22Q8IZ63 422 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 ZFP62Q8NB50 900 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 OR5M3Q8NGP4 307 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 OMA1Q96E52 524 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 TEX37Q96LM6 180 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 SECISBP2Q96T21 854 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 FAM173AQ9BQD7 235 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 CLMPQ9H6B4 373 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 NEUROD4Q9HD90 331 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 TCF7L2Q9NQB0 619 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 SIRT3Q9NTG7 399 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 TTC36A6NLP5 189 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 E9PBE3 544 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 RNASET2O00584 256 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 EMC8O43402 210 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 EDF1O60869 148 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 WISP1O95388 367 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 CBX6O95503 412 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 C6orf47O95873 294 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 NME5P56597 212 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 WNT3P56703 355 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 UFM1P61960 85 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 PRR5P85299 388 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 ZNHIT3Q15649 155 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 GSTA3Q16772 222 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 OR4F3Q6IEY1 312 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 SLC44A2Q8IWA5 706 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 SLC34A3Q8N130 599 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 FBXW8Q8N3Y1 598 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 OR2M7Q8NG81 312 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 TMBIM1Q969X1 311 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 MS4A4EQ96PG1 132 aa18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 SDR39U1Q9NRG7 319 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-207ENST00000409417 RELNP78509 3460 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 A0A0G2JMM0 328 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 A0A1W2PPB8 328 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 A0A1W2PRS3 328 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 ANKRD33BA6NCL7 494 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 KIR3DP1A8MWS1 328 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 G3V3Y1 287 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 POLR3GO15318 223 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 EDN3P14138 238 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 ZNF24P17028 368 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 MST1P26927 711 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 ALDH6A1Q02252 535 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 FAM174BQ3ZCQ3 159 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 CYP27C1Q4G0S4 372 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 PDCD4Q53EL6 469 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 RNFT1Q5M7Z0 435 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 ANXA8L1Q5VT79 327 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 GK5Q6ZS86 529 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 GLB1L3Q8NCI6 653 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 ST6GALNAC3Q8NDV1 305 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 VPS37AQ8NEZ2 397 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 NUP43Q8NFH3 380 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 HOXB13Q92826 284 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 FAM120BQ96EK7 910 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 GIMAP5Q96F15 307 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 LMF2Q9BU23 707 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 EQTNQ9NQ60 294 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 CNOT11Q9UKZ1 510 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 OR10H1Q9Y4A9 318 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 SNX8Q9Y5X2 465 aa18.25■□□□□ 0.51
PDLIM2-207ENST00000409417 ESPL1Q14674 2120 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 PRSS51A0A1B0GVH4 220 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 CFLARO15519 480 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 SCN2BO60939 215 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 ABCB7O75027 752 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 PIGAP37287 484 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms