RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 VAC14Q08AM6 782 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 AIMP2Q13155 320 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 DUSP5Q16690 384 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 GLIPR1L2Q4G1C9 344 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 ASRGL1Q7L266 308 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 HORMAD2Q8N7B1 307 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 OR7G1Q8NGA0 311 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 SFXN5Q8TD22 340 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 VPS50Q96JG6 964 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 VSTM2LQ96N03 204 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 CPPED1Q9BRF8 314 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 NXF5Q9H1B4 397 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 CDCP1Q9H5V8 836 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 PPIEQ9UNP9 301 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 USP22Q9UPT9 525 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 KCNMB2Q9Y691 235 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 SYNDIG1LA6NDD5 238 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 DNAJC8O75937 253 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 OR2J2O76002 312 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 SERPINA7P05543 415 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 ZCCHC18P0CG32 403 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 OR12D1P0DN82 309 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 GABRA3P34903 492 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 MVDP53602 400 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 PSG6Q00889 435 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 LRRC74AQ0VAA2 488 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 RUNDC3AQ59EK9 446 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 CCNJQ5T5M9 372 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 HLA-DQA1Q5Y7H0 255 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 DESI1Q6ICB0 168 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 NANOGP8Q6NSW7 305 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC44A2Q8IWA5 706 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 GALNT16Q8N428 558 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 TMEM102Q8N9M5 508 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 C7orf57Q8NEG2 295 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 PSMF1Q92530 271 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 CDS1Q92903 461 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 EXTL1Q92935 676 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 ADIPOR1Q96A54 375 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 NEURL3Q96EH8 262 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 ANKRD27Q96NW4 1050 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 OR7D2Q96RA2 312 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 THUMPD3Q9BV44 507 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 NANOGQ9H9S0 305 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 GPR83Q9NYM4 423 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 NTMQ9P121 344 aa13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 RRP15Q9Y3B9 282 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 ANKRD11Q6UB99 2663 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-204ENST00000409323 ZFAND5O76080 213 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 SLITRK5O94991 958 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 CT45A8P0DMV1 189 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 CT45A9P0DMV2 189 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 CALB2P22676 271 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 RRADP55042 308 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 NCALDP61601 193 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 MYBPC3Q14896 1274 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 CT45A2Q5DJT8 189 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 COQ5Q5HYK3 327 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 LINC00696Q6ZRV3 163 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 RBM15BQ8NDT2 890 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 FDCSPQ8NFU4 85 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 OR5M3Q8NGP4 307 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 GPR151Q8TDV0 419 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 XAGE5Q8WWM1 108 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 MAL2Q969L2 176 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC7A6OSQ96CW6 309 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 RMND5BQ96G75 393 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC35A4Q96G79 324 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 ACTRT3Q9BYD9 372 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 ZBTB20Q9HC78 741 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 GID8Q9NWU2 228 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 PRODH2Q9UF12 536 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 MGAQ8IWI9 3026 aa13.05□□□□□ -0.32
CHRNA1-204ENST00000409323 TMEM8BA6NDV4 472 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 BCAS2O75934 225 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 ALPPP05187 535 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 ICAM2P13598 275 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC6A2P23975 617 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 PRIM2P49643 509 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC7A2P52569 658 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 RGNQ15493 299 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 CRTC2Q53ET0 693 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 FIGNL1Q6PIW4 674 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 HMGN2P46Q86SG4 172 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 OR10A6Q8NH74 314 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 ADAMTS15Q8TE58 950 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 MOAP1Q96BY2 351 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 LHPPQ9H008 270 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 FBXO34Q9NWN3 711 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 MYOTQ9UBF9 498 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 OR10H1Q9Y4A9 318 aa13.04□□□□□ -0.32
CHRNA1-204ENST00000409323 EML6Q6ZMW3 1958 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms