RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 RDH12Q96NR8 316 aa13.15□□□□□ -0.3
PRAME-205ENST00000405655 ZNF607Q96SK3 696 aa13.15□□□□□ -0.3
PRAME-205ENST00000405655 GPA33Q99795 319 aa13.15□□□□□ -0.3
PRAME-205ENST00000405655 ACTRT3Q9BYD9 372 aa13.15□□□□□ -0.3
PRAME-205ENST00000405655 PAPOLBQ9NRJ5 636 aaKnown RBP13.15□□□□□ -0.3
PRAME-205ENST00000405655 SELENONQ9NZV5 590 aa13.15□□□□□ -0.3
PRAME-205ENST00000405655 RNF6Q9Y252 685 aa13.15□□□□□ -0.3
PRAME-205ENST00000405655 DTX4Q9Y2E6 619 aa13.15□□□□□ -0.3
PRAME-205ENST00000405655 URADA6NGE7 173 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 TRIM64CA6NLI5 447 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 A8MVJ9 347 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 CDH2P19022 906 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 ELAVL4P26378 380 aaKnown RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 TRHRP34981 398 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 GABRA4P48169 554 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 IDH2P48735 452 aaKnown RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 HNRNPKP61978 463 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■■■■□ 20.2
PRAME-205ENST00000405655 GPR68Q15743 365 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 C14orf28Q4W4Y0 310 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 GPR107Q5VW38 600 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 ZBTB46Q86UZ6 589 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 TAGAPQ8N103 731 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 ZNF655Q8N720 491 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 SLC7A13Q8TCU3 470 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 DGCR14Q96DF8 476 aaKnown RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 SPACA7Q96KW9 195 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 ZNF347Q96SE7 839 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 ANKHQ9HCJ1 492 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 MAN2C1Q9NTJ4 1040 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 KCNE5Q9UJ90 142 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 CPSF4LA6NMK7 179 aaKnown RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 PEX12O00623 359 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 CCNB2O95067 398 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 GPR75O95800 540 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 ANGPTL1O95841 491 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 SSTR4P31391 388 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 CSF2RBP32927 897 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 KRT20P35900 424 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 NUDT1P36639 197 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 OR1D4P47884 311 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 ARFIP1P53367 373 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 MAD2L1BPQ15013 274 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 PRICKLE4Q2TBC4 344 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 PRTGQ2VWP7 1150 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 ZNF311Q5JNZ3 666 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 FRRS1Q6ZNA5 592 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 C17orf82Q86X59 251 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 SPARTQ8N0X7 666 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 OR2L13Q8N349 312 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 MMABQ96EY8 250 aaPredicted RBP13.14□□□□□ -0.31
PRAME-205ENST00000405655 NRBF2Q96F24 287 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 DGCR6LQ9BY27 220 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 LHPPQ9H008 270 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 MAT2BQ9NZL9 334 aa13.14□□□□□ -0.31
PRAME-205ENST00000405655 TMEM247A6NEH6 219 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 FOXD2O60548 495 aaPredicted RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 SERPINB7O75635 380 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 INMTO95050 263 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 GKN3PP0CG01 181 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 PRG2P13727 222 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 CBLP22681 906 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 KCNC4Q03721 635 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 ZC3H12BQ5HYM0 836 aaKnown RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 CWF19L1Q69YN2 538 aaKnown RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 PODNL1Q6PEZ8 512 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 CAMKK1Q8N5S9 505 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 FAM81AQ8TBF8 368 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 DNASE2BQ8WZ79 361 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 HDAC2Q92769 488 aaKnown RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 THAP11Q96EK4 314 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 LYRM4Q9HD34 91 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 C11orf16Q9NQ32 467 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 ZNF226Q9NYT6 803 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 DHCR7Q9UBM7 475 aaKnown RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 KCND3Q9UK17 655 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 ATXN7L1Q9ULK2 861 aaPredicted RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 CELSR3Q9NYQ7 3312 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 SMIM31A0A1B0GVY4 71 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 HYKKA2RU49 373 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 OR10H3O60404 316 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 UGT2B11O75310 529 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 LGI1O95970 557 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 ADRA2AP08913 450 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 ITGA2P17301 1181 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 DDX5P17844 614 aaKnown RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 AFF3P51826 1226 aaKnown RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 EFNA3P52797 238 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 TYW3Q6IPR3 259 aaKnown RBP13.13□□□□□ -0.31
PRAME-205ENST00000405655 ZNF773Q6PK81 442 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 IQCHQ86VS3 1027 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 IQCF1Q8N6M8 205 aa13.13□□□□□ -0.31
PRAME-205ENST00000405655 MIPOL1Q8TD10 442 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms