RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 NID1P14543 1247 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 STX2P32856 288 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 MAGEA3P43357 314 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 IER3P46695 156 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 SLCO1A2P46721 670 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 RGS6P49758 472 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 TPMTP51580 245 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 PGDP52209 483 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 VAV2P52735 878 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 BNIP3Q12983 259 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 GAGE1Q13065 139 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 KRT81Q14533 505 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 ZNF699Q32M78 642 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 COX19Q49B96 90 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 KLHL12Q53G59 568 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 KIAA1755Q5JYT7 1200 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 SPOUT1Q5T280 376 aaKnown RBP5.32□□□□□ -1.56
CNGA1-202ENST00000402813 TEX38Q6PEX7 206 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 CCNI2Q6ZMN8 369 aaPredicted RBP5.32□□□□□ -1.56
CNGA1-202ENST00000402813 PRR23BQ6ZRT6 265 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 Q6ZUG5 572 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 TFAP2DQ7Z6R9 452 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 TMEM139Q8IV31 216 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 BOD1L2Q8IYS8 172 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 FBXO36Q8NEA4 188 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 MAFAQ8NHW3 353 aaPredicted RBP5.32□□□□□ -1.56
CNGA1-202ENST00000402813 NUDCD2Q8WVJ2 157 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 OVCA2Q8WZ82 227 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 CHAMP1Q96JM3 812 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 WFIKKN1Q96NZ8 548 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 MCCC1Q96RQ3 725 aaPredicted RBP5.32□□□□□ -1.56
CNGA1-202ENST00000402813 C12orf57Q99622 126 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 CENPKQ9BS16 269 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 PCGF1Q9BSM1 259 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 DDA1Q9BW61 102 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 EBF2Q9HAK2 575 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 DYRK4Q9NR20 520 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 GAR1Q9NY12 217 aaKnown RBP5.32□□□□□ -1.56
CNGA1-202ENST00000402813 VNN3Q9NY84 501 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 CCDC59Q9P031 241 aaKnown RBP5.32□□□□□ -1.56
CNGA1-202ENST00000402813 A4GNTQ9UNA3 340 aa5.32□□□□□ -1.56
CNGA1-202ENST00000402813 CSDC2Q9Y534 153 aaKnown RBP5.32□□□□□ -1.56
CNGA1-202ENST00000402813 MYH3P11055 1940 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PQLC2LA1A4F0 135 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 TMEM89A2RUT3 159 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 DUXAA6NLW8 204 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 KLRF2D3W0D1 207 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 E9PQ18 207 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 CYB561D2O14569 222 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PTGESO14684 152 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SLC28A2O43868 658 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SLC25A12O75746 678 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 VNN1O95497 513 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 TSPAN12O95859 305 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 IFNA2P01563 188 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SERPINB2P05120 415 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 UBCP0CG48 685 aaKnown RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SLC2A4P14672 509 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 GOT1P17174 413 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 ANXA7P20073 488 aaKnown RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 FMO4P31512 558 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SHMT2P34897 504 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 MPLP40238 635 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PTGFRP43088 359 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 UCNP55089 124 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 CLDN18P56856 261 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 CTXN1P60606 82 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PDIA2Q13087 525 aaKnown RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 ZNF268Q14587 947 aaPredicted RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 C6orf226Q5I0X4 101 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 CXorf66Q5JRM2 361 aaPredicted RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 EEF1DP3Q658K8 133 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 FAM198BQ6UWH4 519 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 Q6ZNB5 142 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SEM1Q6ZVN7 128 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PRUNE1Q86TP1 453 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 TSPAN33Q86UF1 283 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 HS3ST5Q8IZT8 346 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 CCDC54Q8NEL0 328 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 VANGL1Q8TAA9 524 aaPredicted RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SOCS4Q8WXH5 440 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 P2RX5Q93086 422 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PIGTQ969N2 578 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 BIRC7Q96CA5 298 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 NXNL1Q96CM4 212 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 NSL1Q96IY1 281 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SERPINB12Q96P63 405 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 RBM24Q9BX46 236 aaKnown RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SLC46A2Q9BY10 475 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 UCK2Q9BZX2 261 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 HRASLSQ9HDD0 168 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 SMPD4Q9NXE4 827 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 TEX10Q9NXF1 929 aaPredicted RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 OPN4Q9UHM6 478 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PPP1R3CQ9UQK1 317 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 PRELID3BQ9Y3B1 194 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 ELOA3CA0A087WX78 387 aaPredicted RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 TRBV11-1A0A0K0K1C0 115 aa5.31□□□□□ -1.56
CNGA1-202ENST00000402813 ELOA3DA6NLF2 546 aaPredicted RBP5.31□□□□□ -1.56
CNGA1-202ENST00000402813 RFPL4AA6NLU0 287 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms