RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 FKBP10Q96AY3 582 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 COQ10AQ96MF6 247 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SARDHQ9UL12 918 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 HSPE1-MOB4S4R3N1 261 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 COL22A1Q8NFW1 1626 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 TOGARAM1Q9Y4F4 1720 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 LOC105369274A0A096LPK9 316 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 NPIPA2E9PIF3 369 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 NPIPA3F8WFD2 350 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 LYRM1O43325 122 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 PRSS56P0CW18 603 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CBLP22681 906 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CCND3P30281 292 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CTHP32929 405 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 HYAL2Q12891 473 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 UNC5DQ6UXZ4 953 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 C6orf120Q7Z4R8 191 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 OR4N4Q8N0Y3 316 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CHDHQ8NE62 594 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SLC5A11Q8WWX8 675 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ARNTL2Q8WYA1 636 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 OR4K3Q96R72 315 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 C20orf27Q9GZN8 174 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 EIF5A2Q9GZV4 153 aaKnown RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 PLAGL1Q9UM63 463 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 FAAHO00519 579 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 INHAP05111 366 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SHMT2P34897 504 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SLC11A1P49279 550 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 DHPSP49366 369 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 PRKXP51817 358 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 FOXA1P55317 472 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 POU6F2P78424 691 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 MELKQ14680 651 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 C18orf21Q32NC0 220 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF791Q3KP31 576 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 COQ5Q5HYK3 327 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 DCP2Q8IU60 420 aaKnown RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 HOXB13Q92826 284 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 AGPAT4Q9NRZ5 378 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 VNN3Q9NY84 501 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 IL37Q9NZH6 218 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 KLHL13Q9P2N7 655 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 UBE2J1Q9Y385 318 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 BTAF1O14981 1849 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 TCRBV5S1A1TA0A578 114 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ANKRD33BA6NCL7 494 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 TVP23AA6NH52 213 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 A8MUA0 341 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 A8MXE2 369 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 RNF13O43567 381 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SCAF4O95104 1147 aaKnown RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CCNOP22674 350 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CD68P34810 354 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 MAGEA3P43357 314 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 GCGRP47871 477 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 RNF144AP50876 292 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 GPR143P51810 404 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ERVPABLB-1P60509 514 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ZXDBP98169 803 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 EMX1Q04741 257 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 FADDQ13158 208 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF169Q14929 603 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 RANBP10Q6VN20 620 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF280BQ86YH2 543 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CMTM8Q8IZV2 173 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF611Q8N823 705 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 PROKR1Q8TCW9 393 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SCAMP4Q969E2 229 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 MALSU1Q96EH3 234 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SSX3Q99909 188 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 C17orf62Q9BQA9 187 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 DNTTIP1Q9H147 329 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 MEPEQ9NQ76 525 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 C17orf113A0A1B0GUU1 675 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 OR6C74A6NCV1 312 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 OR5K4A6NMS3 321 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 ZBTB42B2RXF5 422 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 B4DGG1 531 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 POLR1CO15160 346 aaPredicted RBP8.44□□□□□ -1.06
PTPRM-202ENST00000400053 AMY2BP19961 511 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 ACTBP60709 375 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 ACTA2P62736 377 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 ACTG1P63261 375 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 ACTG2P63267 376 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 ID2Q02363 134 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 RAB41Q5JT25 222 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 WDR53Q7Z5U6 358 aaPredicted RBP8.44□□□□□ -1.06
PTPRM-202ENST00000400053 COMTD1Q86VU5 262 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 CCDC116Q8IYX3 515 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 CCDC71LQ8N9Z2 235 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 TOR1AIP2Q8NFQ8 470 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 TRIB2Q92519 343 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 GCDHQ92947 438 aaPredicted RBP8.44□□□□□ -1.06
PTPRM-202ENST00000400053 ANKMY1Q9P2S6 941 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 GPR52Q9Y2T5 361 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 A0A1W2PRU2 124 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 CIB4A0PJX0 185 aa8.44□□□□□ -1.06
PTPRM-202ENST00000400053 MEIOCA2RUB1 952 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms