RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ZNF766Q5HY98 468 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 EXOSC6Q5RKV6 272 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 ZNF468Q5VIY5 522 aaPredicted RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 SLC25A25Q6KCM7 469 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 TMEM81Q6P7N7 255 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 ZNF227Q86WZ6 799 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 CPSF7Q8N684 471 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 Q8NA96 180 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 SIMC1Q8NDZ2 872 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 CATSPER1Q8NEC5 780 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 TSPEARQ8WU66 669 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 FAM120BQ96EK7 910 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 C5orf34Q96MH7 638 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 SIGLEC12Q96PQ1 595 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 TMEM120AQ9BXJ8 343 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 CXorf36Q9H7Y0 433 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 LIN28AQ9H9Z2 209 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 SH2D2AQ9NP31 389 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 TIMMDC1Q9NPL8 285 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 DTX4Q9Y2E6 619 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 KLF13Q9Y2Y9 288 aaPredicted RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 CSAG2Q9Y5P2 127 aa16.31■□□□□ 0.2
CTNS-203ENST00000399306 COPG1Q9Y678 874 aaKnown RBP16.31■□□□□ 0.2
CTNS-203ENST00000399306 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 CFLARO15519 480 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 NME2P1O60361 137 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 ZNF354AO60765 605 aaPredicted RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 SLC25A12O75746 678 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 C1QL1O75973 258 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 OR6B1O95007 311 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 NME2P22392 152 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 ABCD3P28288 659 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 ADSLP30566 484 aaPredicted RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 MAGEA8P43361 318 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 RPP38P78345 283 aaKnown RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 TXNL4AP83876 142 aaKnown RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 PSG6Q00889 435 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 RCAN2Q14206 197 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 MFSD12Q6NUT3 480 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 BLOC1S3Q6QNY0 202 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 C16orf47Q6ZP98 133 aaPredicted RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 PTRH1Q86Y79 214 aaKnown RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 SLC34A3Q8N130 599 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 PAQR8Q8TEZ7 354 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 NUDT8Q8WV74 236 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 GIMAP5Q96F15 307 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 MARK4Q96L34 752 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 OR52E6Q96RD3 313 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 NSRP1Q9H0G5 558 aaKnown RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 RMND5AQ9H871 391 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 ZCCHC3Q9NUD5 404 aaKnown RBP16.3■□□□□ 0.2
CTNS-203ENST00000399306 CNIH4Q9P003 139 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 ERVK-11Q9UQG0 969 aa16.3■□□□□ 0.2
CTNS-203ENST00000399306 GMNCA6NCL1 334 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 ANKRD33BA6NCL7 494 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 TP53I11O14683 189 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 PPM1BO75688 479 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 NKX2-2O95096 273 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 ZCCHC18P0CG32 403 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 UQCRC2P22695 453 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 NME5P56597 212 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 MRPS22P82650 360 aaKnown RBP16.29■□□□□ 0.2
CTNS-203ENST00000399306 C19orf57Q0VDD7 668 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 ZNF155Q12901 538 aaPredicted RBP16.29■□□□□ 0.2
CTNS-203ENST00000399306 MAPKAPK3Q16644 382 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 TBCELQ5QJ74 424 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 SPINK14Q6IE38 97 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 PAOXQ6QHF9 649 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 IL20RBQ6UXL0 311 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 NUP54Q7Z3B4 507 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 POGLUT1Q8NBL1 392 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 FAM98AQ8NCA5 519 aaKnown RBP16.29■□□□□ 0.2
CTNS-203ENST00000399306 DNAJB8Q8NHS0 232 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 THOC1Q96FV9 657 aaKnown RBP16.29■□□□□ 0.2
CTNS-203ENST00000399306 SLC35A4Q96G79 324 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 STACQ99469 402 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 MFRPQ9BY79 579 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 ANKRA2Q9H9E1 313 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 Q9N2J8 555 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 DUSP22Q9NRW4 184 aa16.29■□□□□ 0.2
CTNS-203ENST00000399306 MRTO4Q9UKD2 239 aaKnown RBP16.29■□□□□ 0.2
CTNS-203ENST00000399306 ASPDHA6ND91 283 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 OR6C70A6NIJ9 312 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 NCF2P19878 526 aaPredicted RBP16.28■□□□□ 0.2
CTNS-203ENST00000399306 LCN1P31025 176 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 TRPC1P48995 793 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 DGKQP52824 942 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 PNLIPRP2P54317 469 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 PSMD4P55036 377 aaKnown RBP16.28■□□□□ 0.2
CTNS-203ENST00000399306 KCNK10P57789 538 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 EFR3AQ14156 821 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 CDC73Q6P1J9 531 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 NPSR1Q6W5P4 371 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 FUNDC1Q8IVP5 155 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 CLECL1Q8IZS7 167 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 PSD4Q8NDX1 1056 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 OR4A15Q8NGL6 344 aa16.28■□□□□ 0.2
CTNS-203ENST00000399306 MIPOL1Q8TD10 442 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms