RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 ZDHHC4Q9NPG8 344 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 IMP3Q9NV31 184 aaKnown RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 ACSL5Q9ULC5 683 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 YARS2Q9Y2Z4 477 aaKnown RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 MTCL1Q9Y4B5 1905 aaKnown RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 A0A087WUU8 490 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 GUCY1B2O75343 617 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 UBXN7O94888 489 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 PCDH8O95206 1070 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 MTNR1AP48039 350 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 FUT5Q11128 374 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 DUSP6Q16828 381 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 GLYR1Q49A26 553 aaPredicted RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 MINDY4Q4G0A6 757 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 TMEM107Q6UX40 140 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 ZNF730Q6ZMV8 503 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 SFTPA1Q8IWL2 248 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 CCDC116Q8IYX3 515 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 FAM181AQ8N9Y4 354 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 OR8K5Q8NH50 307 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 QRSL1Q9H0R6 528 aaKnown RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 MMP28Q9H239 520 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 MIXL1Q9H2W2 232 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 KLHL31Q9H511 634 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 ANKRA2Q9H9E1 313 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 FGF20Q9NP95 211 aaPredicted RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 IL23AQ9NPF7 189 aa12.33□□□□□ -0.44
PRAME-201ENST00000398741 PLEKHB1Q9UF11 243 aaPredicted RBP12.33□□□□□ -0.44
PRAME-201ENST00000398741 MEIOCA2RUB1 952 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 SMIM30A4D0T7 59 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 FAM47E-STBD1D6RA91 191 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 RGS13O14921 159 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 FHP07954 510 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 C8orf89P0DMQ9 161 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 ACP5P13686 325 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 DDOSTP39656 456 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 RPS5P46782 204 aaKnown RBP12.32□□□□□ -0.44
PRAME-201ENST00000398741 RAB28P51157 221 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 PRR5P85299 388 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 EFNB1P98172 346 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 ASAH1Q13510 395 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 WSCD2Q2TBF2 565 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 CLEC12AQ5QGZ9 265 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 KIAA1161Q6NSJ0 714 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 GJD3Q8N144 294 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 TM9SF4Q92544 642 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 NR4A3Q92570 626 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 BADQ92934 168 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 MOAP1Q96BY2 351 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 INSM2Q96T92 566 aaPredicted RBP12.32□□□□□ -0.44
PRAME-201ENST00000398741 MACROD1Q9BQ69 325 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 MED18Q9BUE0 208 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 TEX12Q9BXU0 123 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 MRPS30Q9NP92 439 aaKnown RBP12.32□□□□□ -0.44
PRAME-201ENST00000398741 ISYNA1Q9NPH2 558 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 MRPS18AQ9NVS2 196 aaKnown RBP12.32□□□□□ -0.44
PRAME-201ENST00000398741 PLXND1Q9Y4D7 1925 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 LRRK1Q38SD2 2015 aa12.32□□□□□ -0.44
PRAME-201ENST00000398741 IGKV1-8A0A0C4DH67 115 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 FAM172BPA6NC97 362 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CPSF4LA6NMK7 179 aaKnown RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 CENPXA8MT69 81 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 A8MV72 311 aaPredicted RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 PGRMC2O15173 223 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 ALPPP05187 535 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CSF3P09919 207 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 HIST1H1TP22492 207 aaPredicted RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 GABRA5P31644 462 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 BCL6P41182 706 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 MAN2A2P49641 1150 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 GAS1P54826 345 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 MLLT1Q03111 559 aaPredicted RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 MAP4K2Q12851 820 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 HYAL2Q12891 473 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 TSPAN31Q12999 210 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 TPBGQ13641 420 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 TRAM2Q15035 370 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 ZNF750Q32MQ0 723 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 TBRG1Q3YBR2 411 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 FLYWCH1Q4VC44 716 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 PIP5KL1Q5T9C9 394 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 COL13A1Q5TAT6 717 aaPredicted RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 QSOX2Q6ZRP7 698 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 SHFQ7M4L6 423 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 PRICKLE2Q7Z3G6 844 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 FAM20CQ8IXL6 584 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 OR2A1Q8NGT9 310 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 SPPL3Q8TCT6 385 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 FGF11Q92914 225 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 C16orf58Q96GQ5 468 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 DMRTB1Q96MA1 342 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 TM9SF2Q99805 663 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 KATNB1Q9BVA0 655 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 AICDAQ9GZX7 198 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 WDR26Q9H7D7 661 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 EQTNQ9NQ60 294 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms