RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ACVR1BP36896 505 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 F2RL1P55085 397 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 RAB33AQ14088 237 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ZNF423Q2M1K9 1284 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 GPR139Q6DWJ6 353 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 PTCRAQ6ISU1 281 aaPredicted RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 NXPE4Q6UWF7 544 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 LHFPL3Q86UP9 236 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ACBD7Q8N6N7 88 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 OR52E2Q8NGJ4 325 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 OR4K13Q8NH42 304 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 OR52B2Q96RD2 323 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 MOV10Q9HCE1 1003 aaKnown RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 ACTR3BQ9P1U1 418 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ONECUT3O60422 494 aaPredicted RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 SERPINA5P05154 406 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 DBHP09172 617 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ICAM2P13598 275 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 IL2RGP31785 369 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 CSNK1A1P48729 337 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 RGS6P49758 472 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 CAV2P51636 162 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 AQP4P55087 323 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 FXYD4P59646 89 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ACTA2P62736 377 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ACTG2P63267 376 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 POU4F2Q12837 409 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 DYRK1AQ13627 763 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 PTGR1Q14914 329 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 PTPRRQ15256 657 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 TRAM1Q15629 374 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 CCDC58Q4VC31 144 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 RTP2Q5QGT7 225 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 C6orf183Q5T699 404 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 AWAT2Q6E213 333 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 OR4C11Q6IEV9 310 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 SHFQ7M4L6 423 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 TRIM73Q86UV7 250 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 RBM12BQ8IXT5 1001 aaKnown RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 CCDC71LQ8N9Z2 235 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 OR5H2Q8NGV7 314 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ZNF516Q92618 1163 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 KCNA7Q96RP8 456 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 SPIN2AQ99865 258 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 SPIN2BQ9BPZ2 258 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 RLIMQ9NVW2 624 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 KCMF1Q9P0J7 381 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 FETUBQ9UGM5 382 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 TRAV6A0A075B6T7 132 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 KIR2DS5A0A0G2JLQ3 304 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 A0A0G2JNG1 304 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 MEGF11A6BM72 1044 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 KIR2DS3K7RE56 304 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 LILRB3O75022 631 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 JAM2P57087 298 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 SEC61A1P61619 476 aaKnown RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 KIR2DS5Q14953 304 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 DCAF12Q5T6F0 453 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 FAM180BQ6P0A1 224 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 LEG1Q6P5S2 330 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 BAIAP2L2Q6UXY1 529 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 MARVELD2Q8N4S9 558 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 SUN5Q8TC36 379 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ZNF675Q8TD23 568 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ZNF431Q8TF32 576 aaPredicted RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 TAMM41Q96BW9 452 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 MSI2Q96DH6 328 aaKnown RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 AURKBQ96GD4 344 aaPredicted RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 SENP5Q96HI0 755 aaPredicted RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 CNN2Q99439 309 aaKnown RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 ZNF559Q9BR84 538 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 C7orf50Q9BRJ6 194 aaKnown RBP6.84□□□□□ -1.31
UPF2-203ENST00000397053 RETREG1Q9H6L5 497 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 SIT1Q9Y3P8 196 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 ATRNO75882 1429 aa6.84□□□□□ -1.31
UPF2-203ENST00000397053 A0A0A6YYC8 382 aaPredicted RBP6.84□□□□□ -1.32
UPF2-203ENST00000397053 LOC102725191A0A1B0GVB3 256 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 I3L1I5 382 aaPredicted RBP6.84□□□□□ -1.32
UPF2-203ENST00000397053 I3L521 148 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 BCAT2O15382 392 aaPredicted RBP6.84□□□□□ -1.32
UPF2-203ENST00000397053 PIP5K1CO60331 668 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 ZFAND5O76080 213 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 MAS1P04201 325 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 P2RY2P41231 377 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 XCR1P46094 333 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 TAS2R38P59533 333 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 UPP1Q16831 310 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 C6orf136Q5SQH8 315 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 METTL2BQ6P1Q9 378 aaKnown RBP6.84□□□□□ -1.32
UPF2-203ENST00000397053 GPR149Q86SP6 731 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 PRR22Q8IZ63 422 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 PACRGLQ8N7B6 248 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 ASCC1Q8N9N2 400 aaKnown RBP6.84□□□□□ -1.32
UPF2-203ENST00000397053 CSNK2A3Q8NEV1 391 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 IL1F10Q8WWZ1 152 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 BIRC7Q96CA5 298 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 ZNF382Q96SR6 550 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 YTHDF1Q9BYJ9 559 aaKnown RBP6.84□□□□□ -1.32
UPF2-203ENST00000397053 RGCCQ9H4X1 137 aa6.84□□□□□ -1.32
UPF2-203ENST00000397053 LRIT1Q9P2V4 623 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms