RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ZNF576Q9H609 170 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 RNF167Q9H6Y7 350 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 IL1RAPQ9NPH3 570 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 POLE3Q9NRF9 147 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 PLCXD1Q9NUJ7 323 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 LYARQ9NX58 379 aaKnown RBP5.06□□□□□ -1.6
VPS41-203ENST00000395969 CPNE7Q9UBL6 633 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 MUTYHQ9UIF7 546 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS41-203ENST00000395969 SLC22A14Q9Y267 594 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 DLGAP4Q9Y2H0 992 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 LILRA5A6NI73 299 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 B4DXG7 233 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 PRAMEF26H0Y7S4 382 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 GNGT2O14610 69 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 MID1O15344 667 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ARHGEF9O43307 516 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 PNLIPP16233 465 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 HNRNPA2B1P22626 353 aaKnown RBP5.06□□□□□ -1.6
VPS41-203ENST00000395969 GDI1P31150 447 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 SOX6P35712 828 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 METAP1P53582 386 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 MTPNP58546 118 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 CSNK1G2P78368 415 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 BAMBIQ13145 260 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 RIN1Q13671 783 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 TIGD6Q17RP2 521 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ZSWIM7Q19AV6 140 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ZBTB37Q5TC79 503 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 HIST2H2AA3Q6FI13 130 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ZCCHC12Q6PEW1 402 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 PLEKHM3Q6ZWE6 761 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 UBE3DQ7Z6J8 389 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 NRROSQ86YC3 692 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 SAMD14Q8IZD0 417 aaPredicted RBP5.06□□□□□ -1.6
VPS41-203ENST00000395969 CYP4Z2PQ8N1L4 340 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 PLA2G15Q8NCC3 412 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 SRFBP1Q8NEF9 429 aaKnown RBP5.06□□□□□ -1.6
VPS41-203ENST00000395969 CDC26Q8NHZ8 85 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 FBXO30Q8TB52 745 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 UBASH3BQ8TF42 649 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ASB15Q8WXK1 588 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 PDXPQ96GD0 296 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 APIPQ96GX9 242 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 Q96MT0 163 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 OCSTAMPQ9BR26 566 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 SRRQ9GZT4 340 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 SLC22A4Q9H015 551 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 MMP28Q9H239 520 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 OR51E2Q9H255 320 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ANKRD19PQ9H560 264 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ELOVL6Q9H5J4 265 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 C1GALT1Q9NS00 363 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 VNN3Q9NY84 501 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 VAPAQ9P0L0 249 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 EPHA6Q9UF33 1036 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 ATPIF1Q9UII2 106 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 SAMD4AQ9UPU9 718 aaKnown RBP5.06□□□□□ -1.6
VPS41-203ENST00000395969 CFL2Q9Y281 166 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 DYRK1BQ9Y463 629 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 CSNK1G3Q9Y6M4 447 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 COLEC10Q9Y6Z7 277 aa5.06□□□□□ -1.6
VPS41-203ENST00000395969 A0A1W2PR77 199 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PRSS38A1L453 326 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 I3L521 148 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 AKR7A2O43488 359 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PCDHGA12O60330 932 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 MMP20O60882 483 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 OR2B3O76000 313 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 EGFP01133 1207 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 IGHV4-34P06331 123 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PF4V1P10720 104 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 UQCRC2P22695 453 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 KIR3DL1P43629 444 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 FASLGP48023 281 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SOX9P48436 509 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 MAPK12P53778 367 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PRSS12P56730 875 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 RPS15AP62244 130 aaKnown RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 GRM7Q14831 915 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 MAPKAPK3Q16644 382 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ZNF630Q2M218 657 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 SOWAHCQ53LP3 525 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 SLC35F1Q5T1Q4 408 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ARMC4Q5T2S8 1044 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SLC6A19Q695T7 634 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ZNF782Q6ZMW2 699 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 AHSA2Q719I0 299 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ZNF551Q7Z340 670 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 NUP54Q7Z3B4 507 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 HDDC2Q7Z4H3 204 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 GALNT5Q7Z7M9 940 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SLC43A2Q8N370 569 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 RYBPQ8N488 228 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 C12orf76Q8N812 135 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 LINC01555Q8NAE3 123 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 OR2T12Q8NG77 320 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 OR4C15Q8NGM1 316 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SELENOMQ8WWX9 145 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 BMFQ96LC9 184 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms