RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ZNF483Q8TF39 744 aaPredicted RBP5.65□□□□□ -1.5
PTPN20-208ENST00000395727 NINJ1Q92982 152 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 NTNG2Q96CW9 530 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 RBM18Q96H35 190 aaKnown RBP5.65□□□□□ -1.5
PTPN20-208ENST00000395727 SENP5Q96HI0 755 aaPredicted RBP5.65□□□□□ -1.5
PTPN20-208ENST00000395727 DGAT2Q96PD7 388 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 SECISBP2Q96T21 854 aaKnown RBP5.65□□□□□ -1.5
PTPN20-208ENST00000395727 MTERF1Q99551 399 aaKnown RBP5.65□□□□□ -1.5
PTPN20-208ENST00000395727 FAM173AQ9BQD7 235 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 WDR41Q9HAD4 459 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 BRF2Q9HAW0 419 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 DEPPQ9NTK1 212 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 QPCTLQ9NXS2 382 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 CPSF2Q9P2I0 782 aaKnown RBP5.65□□□□□ -1.5
PTPN20-208ENST00000395727 TRPS1Q9UHF7 1281 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 TINAGQ9UJW2 476 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 NPIPA1Q9UND3 350 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 ERVK-11Q9UQG0 969 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 STK38LQ9Y2H1 464 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 RNF11Q9Y3C5 154 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 ATG4BQ9Y4P1 393 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 IKBKGQ9Y6K9 419 aa5.65□□□□□ -1.5
PTPN20-208ENST00000395727 EXOC1LA0A1B0GW35 172 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 A0A1W2PR48 441 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 C1orf226A1L170 272 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 LRRC14BA6NHZ5 514 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 A8MT66 165 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TRIM49D1C9J1S8 452 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 H3BQF6 201 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TMPRSS11DO60235 418 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 HS6ST1O60243 411 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 GUCY1B2O75343 617 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 EEDO75530 441 aaKnown RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 OR6B1O95007 311 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SIX3O95343 332 aaPredicted RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CLDN14O95500 239 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 AIFM1O95831 613 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CLPSP04118 112 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 ATP1B1P05026 303 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 GSTA1P08263 222 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 HOXD4P09016 255 aaPredicted RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SBK3P0C264 359 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 GCAP28676 217 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 PTGS2P35354 604 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 GSTM5P46439 218 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CCNG1P51959 295 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TRA2BP62995 288 aaKnown RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 HERVK_113P63132 956 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 FUT7Q11130 342 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 FOXO1Q12778 655 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CSTF3Q12996 717 aaKnown RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 DDX39BQ13838 428 aaKnown RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 NTRK2Q16620 822 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TMEM177Q53S58 311 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 C18orf63Q68DL7 685 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SP5Q6BEB4 398 aaPredicted RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CYP20A1Q6UW02 462 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CD300LDQ6UXZ3 194 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SLC29A4Q7RTT9 530 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 GDF7Q7Z4P5 450 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 DOLPP1Q86YN1 238 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 MYLK4Q86YV6 388 aaPredicted RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 IFT20Q8IY31 132 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 FBXW8Q8N3Y1 598 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 FAM109AQ8N4B1 249 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 RNF175Q8N4F7 328 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 ZNF321PQ8N8H1 164 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 OR4F6Q8NGB9 312 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 KIF18AQ8NI77 898 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 AGAP11Q8TF27 550 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SPACA9Q96E40 222 aaPredicted RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 C11orf24Q96F05 449 aaPredicted RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SCYL1Q96KG9 808 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 ZNF382Q96SR6 550 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 YIPF4Q9BSR8 244 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SORBS1Q9BX66 1292 aaKnown RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 ERVK-6Q9BXR3 956 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TTTY12Q9BZ98 90 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TXLNGYQ9BZA5 131 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 OR8D2Q9GZM6 311 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 ENKD1Q9H0I2 346 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 VPS11Q9H270 941 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TP63Q9H3D4 680 aaPredicted RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 NOL11Q9H8H0 719 aaKnown RBP5.64□□□□□ -1.51
PTPN20-208ENST00000395727 PPCSQ9HAB8 311 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CXorf21Q9HAI6 301 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 IL1RL2Q9HB29 575 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 SACM1LQ9NTJ5 587 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 NMRK1Q9NWW6 199 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 AHSPQ9NZD4 102 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CNIH4Q9P003 139 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 CES1P1Q9UKY3 287 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 PMF1-BGLAPU3KQ54 211 aa5.64□□□□□ -1.51
PTPN20-208ENST00000395727 TEX15Q9BXT5 2789 aa5.63□□□□□ -1.51
PTPN20-208ENST00000395727 CNTRLQ7Z7A1 2325 aa5.63□□□□□ -1.51
PTPN20-208ENST00000395727 IQANK1A0A1B0GTG1 560 aa5.63□□□□□ -1.51
PTPN20-208ENST00000395727 PINLYPA6NC86 204 aa5.63□□□□□ -1.51
PTPN20-208ENST00000395727 ENO4A6NNW6 628 aa5.63□□□□□ -1.51
PTPN20-208ENST00000395727 CAPN14A8MX76 684 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms