RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 OR4F3Q6IEY1 312 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 TMEM107Q6UX40 140 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 NUP54Q7Z3B4 507 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 PTRH1Q86Y79 214 aaKnown RBP6.25□□□□□ -1.41
UBBP1-201ENST00000392399 CYP4Z2PQ8N1L4 340 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 TRIML2Q8N7C3 387 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 AMER2Q8N7J2 671 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 CDRT4Q8N9R6 151 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 GOLM1Q8NBJ4 401 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 MDS2Q8NDY4 140 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 NUP43Q8NFH3 380 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 OR56A1Q8NGH5 318 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 DNAJB8Q8NHS0 232 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 GOT1L1Q8NHS2 421 aaPredicted RBP6.25□□□□□ -1.41
UBBP1-201ENST00000392399 RFWD2Q8NHY2 731 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 SFXN5Q8TD22 340 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 BCAS4Q8TDM0 211 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 DOK4Q8TEW6 326 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 TSPEARQ8WU66 669 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 SCMH1Q96GD3 660 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 TEX37Q96LM6 180 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 C5orf34Q96MH7 638 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 VSTM2LQ96N03 204 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 CCDC115Q96NT0 180 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 BTBD9Q96Q07 612 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 OR52E6Q96RD3 313 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 GAL3ST4Q96RP7 486 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 RMND5AQ9H871 391 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 LIN28AQ9H9Z2 209 aaKnown RBP6.25□□□□□ -1.41
UBBP1-201ENST00000392399 FOLH1BQ9HBA9 442 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 TIMMDC1Q9NPL8 285 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 FGFR1OP2Q9NVK5 253 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 GIN1Q9NXP7 522 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 CNIH4Q9P003 139 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 KLHL14Q9P2G3 628 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 MRTO4Q9UKD2 239 aaKnown RBP6.25□□□□□ -1.41
UBBP1-201ENST00000392399 ERVK-11Q9UQG0 969 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 KLF13Q9Y2Y9 288 aaPredicted RBP6.25□□□□□ -1.41
UBBP1-201ENST00000392399 NPFFR2Q9Y5X5 522 aa6.25□□□□□ -1.41
UBBP1-201ENST00000392399 ANKRD33BA6NCL7 494 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 OR6C70A6NIJ9 312 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 DUXAA6NLW8 204 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 RNF223E7ERA6 249 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 KLRC4-KLRK1H3BQV0 150 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NDUFAB1O14561 156 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 MAN1A2O60476 641 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ERN1O75460 977 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PPM1BO75688 479 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SLC25A12O75746 678 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SORBS2O94875 1100 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NKX2-2O95096 273 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 RASAL1O95294 804 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NADKO95544 446 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 C6orf47O95873 294 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ZCCHC18P0CG32 403 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CT45A8P0DMV1 189 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CT45A9P0DMV2 189 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NCF2P19878 526 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CNR1P21554 472 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 UQCRC2P22695 453 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ABCD3P28288 659 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 IL12AP29459 219 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ADSLP30566 484 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 KRT20P35900 424 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SOX3P41225 446 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 MAP3K8P41279 467 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 MAGEA8P43361 318 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CD97P48960 835 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 TRPC1P48995 793 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CDK9P50750 372 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 POLR2JP52435 117 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PNLIPRP2P54317 469 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PSMD4P55036 377 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NME5P56597 212 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 KCNK10P57789 538 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 HBA1P69905 142 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PHC1P78364 1004 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 TXNL4AP83876 142 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 PSG6Q00889 435 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 DUSP8Q13202 625 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 TP53BP2Q13625 1128 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SQLEQ14534 574 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NTRK2Q16620 822 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 MAPKAPK3Q16644 382 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF791Q3KP31 576 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 NADK2Q4G0N4 442 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CT45A2Q5DJT8 189 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF766Q5HY98 468 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF468Q5VIY5 522 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SLC22A10Q63ZE4 541 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SPINK14Q6IE38 97 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 TMEM81Q6P7N7 255 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 IL20RBQ6UXL0 311 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 C16orf47Q6ZP98 133 aaPredicted RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 RTL4Q6ZR62 310 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 SLC34A3Q8N130 599 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF843Q8N446 348 aa6.24□□□□□ -1.41
UBBP1-201ENST00000392399 CPSF7Q8N684 471 aaKnown RBP6.24□□□□□ -1.41
UBBP1-201ENST00000392399 POGLUT1Q8NBL1 392 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms