RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 COQ10AQ96MF6 247 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 EGLN3Q9H6Z9 239 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 OR6C2Q9NZP2 312 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 MYO7AQ13402 2215 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 SLC43A1O75387 559 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 C1SP09871 688 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 CBSLP0DN79 551 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 CSF2RAP15509 400 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 HOXB9P17482 250 aaPredicted RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 RHCEP18577 417 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 CBSP35520 551 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 LIMK1P53667 647 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 RPS7P62081 194 aaKnown RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 GRK1Q15835 563 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 KIAA1324Q6UXG2 1013 aaKnown RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 TECPR1Q7Z6L1 1165 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 LAS2Q8IYD9 372 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 LSM14AQ8ND56 463 aaKnown RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 RFT1Q96AA3 541 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 AP2M1Q96CW1 435 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 MVB12BQ9H7P6 319 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 NANSQ9NR45 359 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 A0A1W2PRB8 838 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 JUPP14923 745 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 PTX3P26022 381 aaPredicted RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 BDKRB1P46663 353 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 TSPAN5P62079 268 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SYTL3Q4VX76 610 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 FAM27D1Q5T7N8 215 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 LRRC70Q7Z2Q7 622 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 IZUMO1Q8IYV9 350 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 LILRA3Q8N6C8 439 aaPredicted RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 SRFBP1Q8NEF9 429 aaKnown RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 TTC9Q92623 222 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SAMD11Q96NU1 681 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 FCRL4Q96PJ5 515 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 PIGUQ9H490 435 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 LSM2Q9Y333 95 aaKnown RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 CKAP5Q14008 2032 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 ZNF197O14709 1029 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 FFAR1O14842 300 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 EPHX1P07099 455 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 C8AP07357 584 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 BUD31P41223 144 aaPredicted RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 CDKL4Q5MAI5 379 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SFRP4Q6FHJ7 346 aaPredicted RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 PGBD3Q8N328 593 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SCAMP4Q969E2 229 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 MSLNLQ96KJ4 702 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 WFDC6Q9BQY6 131 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 MARVELD1Q9BSK0 173 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 FNDC11Q9BVV2 318 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 OR51J1Q9H342 316 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 C12orf10Q9HB07 376 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 HCFC1R1Q9NWW0 138 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 MTCL1Q9Y4B5 1905 aaKnown RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 NOTCH4Q99466 2003 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 A0A0G2JN53 185 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SLC28A2O43868 658 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 MOSPD3O75425 235 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 NTN1O95631 604 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 LRG1P02750 347 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SERPIND1P05546 499 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SPINT3P49223 89 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 EVX1P49640 407 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 DSTNP60981 165 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.32
SDC1-202ENST00000381150 SYT14P1Q58G82 188 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 ZNF628Q5EBL2 1059 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 ZNF782Q6ZMW2 699 aaPredicted RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 ESPNLQ6ZVH7 1005 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 CHST14Q8NCH0 376 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SLC7A13Q8TCU3 470 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 SENP5Q96HI0 755 aaPredicted RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 FERD3LQ96RJ6 166 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 WRAP53Q9BUR4 548 aaKnown RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 RANBP3Q9H6Z4 567 aaPredicted RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 IMP3Q9NV31 184 aaKnown RBP13.07□□□□□ -0.32
SDC1-202ENST00000381150 ADAM30Q9UKF2 790 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 CDH10Q9Y6N8 788 aa13.07□□□□□ -0.32
SDC1-202ENST00000381150 KCNE1BA0A087WTH5 132 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 LALBAP00709 142 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 CLTBP09497 229 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 KELP23276 732 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 PPM1AP35813 382 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 PLK5Q496M5 336 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 ST8SIA4Q92187 359 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 RBPMSQ93062 196 aaKnown RBP13.06□□□□□ -0.32
SDC1-202ENST00000381150 TRIM43Q96BQ3 446 aaPredicted RBP13.06□□□□□ -0.32
SDC1-202ENST00000381150 NARS2Q96I59 477 aaKnown RBP13.06□□□□□ -0.32
SDC1-202ENST00000381150 SLC12A9Q9BXP2 914 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 METTL17Q9H7H0 456 aaPredicted RBP13.06□□□□□ -0.32
SDC1-202ENST00000381150 KCNK12Q9HB15 430 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 FOLH1BQ9HBA9 442 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 SAGE1Q9NXZ1 904 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 GULP1Q9UBP9 304 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms