RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 BHLHB9Q6PI77 547 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 C19orf48Q6RUI8 117 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 NPSR1Q6W5P4 371 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 SLC5A8Q8N695 610 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 PCYOX1LQ8NBM8 494 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 SLC16A11Q8NCK7 471 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 FBXO30Q8TB52 745 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 PNPT1Q8TCS8 783 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 EXTL1Q92935 676 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 OTUB1Q96FW1 271 aaPredicted RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 SLC35G5Q96KT7 338 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 BTBD9Q96Q07 612 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 LMF2Q9BU23 707 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 NXF5Q9H1B4 397 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 ZNF552Q9H707 407 aaPredicted RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 TAGLN3Q9UI15 199 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 TPRP12270 2363 aaKnown RBP17.39■□□□□ 0.37
SMN2-202ENST00000380742 CLIC1O00299 241 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 ZNF354AO60765 605 aaPredicted RBP17.39■□□□□ 0.37
SMN2-202ENST00000380742 UNC5CO95185 931 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 DRD5P21918 477 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 PPICP45877 212 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 MAN2A2P49641 1150 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 PRIM2P49643 509 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 NR0B1P51843 470 aaKnown RBP17.39■□□□□ 0.37
SMN2-202ENST00000380742 MVDP53602 400 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 MLF1P58340 268 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 CAPRIN1Q14444 709 aaKnown RBP17.39■□□□□ 0.37
SMN2-202ENST00000380742 ST3GAL2Q16842 350 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 RUNDC3AQ59EK9 446 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 IRAK1BP1Q5VVH5 260 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 ZCCHC12Q6PEW1 402 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 RNF130Q86XS8 419 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 CDRT4Q8N9R6 151 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 C17orf47Q8NEP4 570 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 TP53INP1Q96A56 240 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 LRRC58Q96CX6 371 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 LCORQ96JN0 433 aaPredicted RBP17.39■□□□□ 0.37
SMN2-202ENST00000380742 CGREF1Q99674 301 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 SLC39A3Q9BRY0 314 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 ACTRT3Q9BYD9 372 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 IKZF5Q9H5V7 419 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 EFCAB1Q9HAE3 211 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 ATMQ13315 3056 aa17.39■□□□□ 0.37
SMN2-202ENST00000380742 EML6Q6ZMW3 1958 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 CCT8L1PA6NM43 557 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 OR2J2O76002 312 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 NADKO95544 446 aaPredicted RBP17.38■□□□□ 0.37
SMN2-202ENST00000380742 KRT75O95678 551 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 ITGB2P05107 769 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 T-ENOLP0DO92 83 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 MATN1P21941 496 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 ST13P50502 369 aaKnown RBP17.38■□□□□ 0.37
SMN2-202ENST00000380742 DCAF7P61962 342 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 DUSP5Q16690 384 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 PIGGQ5H8A4 983 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 CRB2Q5IJ48 1285 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 ACER2Q5QJU3 275 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 COX20Q5RI15 118 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 CDC73Q6P1J9 531 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 ANGPTL8Q6UXH0 198 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 GPR155Q7Z3F1 870 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 OR4N2Q8NGD1 307 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 OR5D16Q8NGK9 328 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 MIPOL1Q8TD10 442 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 SLC9A6Q92581 669 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 NSL1Q96IY1 281 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 ZNF354BQ96LW1 612 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 ANKRD27Q96NW4 1050 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 CPPED1Q9BRF8 314 aaPredicted RBP17.38■□□□□ 0.37
SMN2-202ENST00000380742 TRIM8Q9BZR9 551 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.38■□□□□ 0.37
SMN2-202ENST00000380742 FAF1Q9UNN5 650 aaPredicted RBP17.38■□□□□ 0.37
SMN2-202ENST00000380742 GMEB1Q9Y692 573 aa17.38■□□□□ 0.37
SMN2-202ENST00000380742 FRG2CA6NGY1 282 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 ITGA10O75578 1167 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 UBOX5O94941 541 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 NKX2-2O95096 273 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 NPPAP01160 153 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 NUDT2P50583 147 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 SELPLGQ14242 412 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 MEP1AQ16819 746 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 COL28A1Q2UY09 1125 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMN2-202ENST00000380742 AGAP7PQ5VUJ5 663 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 C6orf89Q6UWU4 347 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 SLC44A2Q8IWA5 706 aaPredicted RBP17.37■□□□□ 0.37
SMN2-202ENST00000380742 LGI4Q8N135 537 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 HORMAD2Q8N7B1 307 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 JADE3Q92613 823 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 SLC35A4Q96G79 324 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 AGAP4Q96P64 663 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 OR7D2Q96RA2 312 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 LMF1Q96S06 567 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 RASL10BQ96S79 203 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 OR51I1Q9H343 314 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 ZBTB20Q9HC78 741 aaPredicted RBP17.37■□□□□ 0.37
SMN2-202ENST00000380742 GID8Q9NWU2 228 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 STMN3Q9NZ72 180 aa17.37■□□□□ 0.37
SMN2-202ENST00000380742 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms