RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 C17orf82Q86X59 251 aaPredicted RBP16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 MCATQ8IVS2 390 aaKnown RBP16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 SLC16A11Q8NCK7 471 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 OR6T1Q8NGN1 323 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 RHOXF1Q8NHV9 184 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 ZNF675Q8TD23 568 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 UBE2FQ969M7 185 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 TCTN2Q96GX1 697 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 ARHGDIGQ99819 225 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 STARD5Q9NSY2 213 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 PLCXD1Q9NUJ7 323 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 IMPAD1Q9NX62 359 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 ERVK-18Q9QC07 812 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 FTSJ1Q9UET6 329 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 CLCA2Q9UQC9 943 aa16.39■□□□□ 0.21
NKX2-2-201ENST00000377142 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 SH3PXD2BA1X283 911 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 SLC9B1P1A6NJY1 282 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 FAM227AF5H4B4 570 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 SGK494L7N484 410 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 HCRTR1O43613 425 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 CRISP1P54107 249 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 CDC42P60953 191 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 ID2Q02363 134 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 EMX1Q04741 257 aaPredicted RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PIN1Q13526 163 aaPredicted RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PRTGQ2VWP7 1150 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 NIPAL1Q6NVV3 410 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 DHRS4L2Q6PKH6 230 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PRSS48Q7RTY5 328 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 TMEM52Q8NDY8 209 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 RAB2BQ8WUD1 216 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 SLC9A6Q92581 669 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 CDS1Q92903 461 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 DGCR6LQ9BY27 220 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 UCK2Q9BZX2 261 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 QRSL1Q9H0R6 528 aaKnown RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 CACYBPQ9HB71 228 aaKnown RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 COLQQ9Y215 455 aaPredicted RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PCDHGA10Q9Y5H3 936 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 TRIOBPQ9H2D6 2365 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 ZAR1LA6NP61 321 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 ZNF99A8MXY4 864 aaPredicted RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 LMO7DNF2Z398 122 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PLOD3O60568 738 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 RDH16O75452 317 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 OSMP13725 252 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 NT5EP21589 574 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 CHMP24386 653 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PDX1P52945 283 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PTGES3Q15185 160 aaKnown RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 ARHGAP11BQ3KRB8 267 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 DNAJC22Q8N4W6 341 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 SLC7A13Q8TCU3 470 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 FAR1Q8WVX9 515 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 CDX2Q99626 313 aaPredicted RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 MAP3K3Q99759 626 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 LIN28AQ9H9Z2 209 aaKnown RBP16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 TBC1D17Q9HA65 648 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 KLHL28Q9NXS3 571 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 IFT52Q9Y366 437 aa16.38■□□□□ 0.21
NKX2-2-201ENST00000377142 PRUNE2Q8WUY3 3088 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 MPZL2O60487 215 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 ACP2P11117 423 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 FOSL2P15408 326 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 SOX18P35713 384 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 FOXD4Q12950 439 aaPredicted RBP16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 NDUFA9Q16795 377 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 PGBD2Q6P3X8 592 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 ZCCHC12Q6PEW1 402 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 FRRS1Q6ZNA5 592 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 WDR53Q7Z5U6 358 aaPredicted RBP16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 HMGN2P46Q86SG4 172 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 C1orf216Q8TAB5 229 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 RORBQ92753 470 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 CLDN23Q96B33 292 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 PIGUQ9H490 435 aa16.37■□□□□ 0.21
NKX2-2-201ENST00000377142 NME6O75414 186 aaPredicted RBP16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 MT-ND2P03891 347 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 GABRB1P18505 474 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 CTSKP43235 329 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 DUSP5Q16690 384 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 PRICKLE4Q2TBC4 344 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 TRMT12Q53H54 448 aaKnown RBP16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 EXOSC6Q5RKV6 272 aaKnown RBP16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 AHSA2Q719I0 299 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 VRK2Q86Y07 508 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 CDRT4Q8N9R6 151 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 OR9A4Q8NGU2 314 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 OR52P1PQ8NH57 321 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 SIGLEC11Q96RL6 698 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 NAA50Q9GZZ1 169 aaKnown RBP16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 MTHFD2LQ9H903 347 aaPredicted RBP16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 ADAP2Q9NPF8 381 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 TIMMDC1Q9NPL8 285 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 ZNF226Q9NYT6 803 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 MAT2BQ9NZL9 334 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 SATB2Q9UPW6 733 aa16.36■□□□□ 0.21
NKX2-2-201ENST00000377142 WDR45Q9Y484 360 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms