RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GIN1Q9NXP7 522 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 DAPP1Q9UN19 280 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 DUXAA6NLW8 204 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 MBTPS2O43462 519 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 ENTPD6O75354 484 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 HSMCR30P0CW71 290 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 TAS2R41P59536 307 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 SNRPGP62308 76 aaKnown RBP18.96■□□□□ 0.63
VSX1-202ENST00000376709 OLR1P78380 273 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 ZNF542PQ5EBM4 170 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 BTLAQ7Z6A9 289 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 VRK2Q86Y07 508 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 C9orf43Q8TAL5 461 aaPredicted RBP18.96■□□□□ 0.63
VSX1-202ENST00000376709 ZFPM2Q8WW38 1151 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 ZG16BQ96DA0 208 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 CRELD1Q96HD1 420 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 GSDMCQ9BYG8 508 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 TCEAL2Q9H3H9 227 aaPredicted RBP18.96■□□□□ 0.63
VSX1-202ENST00000376709 TAS2R16Q9NYV7 291 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 USP36Q9P275 1121 aaKnown RBP18.96■□□□□ 0.63
VSX1-202ENST00000376709 PILRAQ9UKJ1 303 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 SCN2AQ99250 2005 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 ZNF860A6NHJ4 632 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 CLDN25C9JDP6 229 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 SMIM10L1P0DMW3 83 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 GLULP15104 373 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 PVRP15151 417 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 MMP11P24347 488 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 COX10Q12887 443 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 RUNX2Q13950 521 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 NDUFA9Q16795 377 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 ABI3BPQ7Z7G0 1075 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 IGFN1Q86VF2 1251 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 FRMD1Q8N878 549 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 GPBAR1Q8TDU6 330 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 VMP1Q96GC9 406 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 SMIM10Q96HG1 83 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 TWSG1Q9GZX9 223 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 ZBTB20Q9HC78 741 aaPredicted RBP18.96■□□□□ 0.63
VSX1-202ENST00000376709 NDOR1Q9UHB4 597 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 CYP8B1Q9UNU6 501 aa18.96■□□□□ 0.63
VSX1-202ENST00000376709 SYT5O00445 386 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 IGHV4-34P06331 123 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 ALOX12P18054 663 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 GADD45AP24522 165 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 IRF3Q14653 427 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 ZNF846Q147U1 533 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 MED22Q15528 200 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 FAM214AQ32MH5 1076 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 ARMCX4Q5H9R4 360 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 C12orf73Q69YU5 71 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 PLAG1Q6DJT9 500 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 MFSD12Q6NUT3 480 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 ZER1Q7Z7L7 766 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 SLC16A11Q8NCK7 471 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 SLC9A6Q92581 669 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 SLC35A4Q96G79 324 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 CDCA4Q9BXL8 241 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 ARMC7Q9H6L4 198 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 TRIM45Q9H8W5 580 aaPredicted RBP18.95■□□□□ 0.62
VSX1-202ENST00000376709 HRASLS2Q9NWW9 162 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 DNAJC27Q9NZQ0 273 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 ENTPD2Q9Y5L3 495 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 PMF1-BGLAPU3KQ54 211 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 H0YGG7 62 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 FRS3O43559 492 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 DNAJB6O75190 326 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 POU3F3P20264 500 aaPredicted RBP18.95■□□□□ 0.62
VSX1-202ENST00000376709 ARF3P61204 181 aaPredicted RBP18.95■□□□□ 0.62
VSX1-202ENST00000376709 INAVAQ3KP66 663 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 LINC00299Q6ZSB3 139 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 ZNF367Q7RTV3 350 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 SLC46A3Q7Z3Q1 461 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 SFTPA2Q8IWL1 248 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 MORN4Q8NDC4 146 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 OR8J1Q8NGP2 316 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 DCSTAMPQ9H295 470 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 FAIMQ9NVQ4 179 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 KLHL28Q9NXS3 571 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 SLC22A7Q9Y694 548 aa18.95■□□□□ 0.62
VSX1-202ENST00000376709 FCMRO60667 390 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 RPLP0P05388 317 aaKnown RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 AVPR1BP47901 424 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 PDX1P52945 283 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 LSM11P83369 360 aaKnown RBP eCLIP18.94■□□□□ 0.62
VSX1-202ENST00000376709 SMAD4Q13485 552 aaKnown RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 COL13A1Q5TAT6 717 aaPredicted RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 CD300LDQ6UXZ3 194 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 TAF8Q7Z7C8 310 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 GJD3Q8N144 294 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 IQCF1Q8N6M8 205 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 ZNF655Q8N720 491 aaPredicted RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 TCEANCQ8N8B7 351 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 WDR36Q8NI36 951 aaKnown RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 SLC37A2Q8TED4 501 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 CDS1Q92903 461 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 TOE1Q96GM8 510 aaKnown RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 PRR14Q9BWN1 585 aa18.94■□□□□ 0.62
VSX1-202ENST00000376709 WDR12Q9GZL7 423 aaKnown RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 POLMQ9NP87 494 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms