RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 WDYHV1Q96HA8 205 aa13.46□□□□□ -0.25
HDAC6-204ENST00000376643 NSUN5Q96P11 429 aaKnown RBP13.46□□□□□ -0.25
HDAC6-204ENST00000376643 COL21A1Q96P44 957 aa13.46□□□□□ -0.25
HDAC6-204ENST00000376643 PIGMQ9H3S5 423 aa13.46□□□□□ -0.25
HDAC6-204ENST00000376643 SENP1Q9P0U3 644 aa13.46□□□□□ -0.25
HDAC6-204ENST00000376643 PLLPQ9Y342 182 aa13.46□□□□□ -0.25
HDAC6-204ENST00000376643 SLC6A5Q9Y345 797 aa13.46□□□□□ -0.25
HDAC6-204ENST00000376643 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC6-204ENST00000376643 EXOC1LA0A1B0GW35 172 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 A8MT66 165 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 TRIM49D1C9J1S8 452 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 H3BQF6 201 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ICOSLGO75144 302 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ULK1O75385 1050 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ENO1P06733 434 aaKnown RBP13.45□□□□□ -0.26
HDAC6-204ENST00000376643 TACR1P25103 407 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 IL12BP29460 328 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 HMOX2P30519 316 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 CLCQ05315 142 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ACSM2AQ08AH3 577 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 EIPR1Q53HC9 387 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ACSM2BQ68CK6 577 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 LETMD1Q6P1Q0 360 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 GPRIN3Q6ZVF9 776 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 CDC20BQ86Y33 519 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 TGIF2LYQ8IUE0 185 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 MMGT1Q8N4V1 131 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 C1orf52Q8N6N3 182 aaKnown RBP13.45□□□□□ -0.26
HDAC6-204ENST00000376643 IFT81Q8WYA0 676 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 WNT2BQ93097 391 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 TM4SF18Q96CE8 201 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 SLC35A4Q96G79 324 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 BTBD9Q96Q07 612 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 UCN2Q96RP3 112 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ZNF382Q96SR6 550 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 OR2B2Q9GZK3 357 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 HHATLQ9HCP6 504 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 CCM2LQ9NUG4 571 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ZNF358Q9NW07 568 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 EHD3Q9NZN3 535 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 MRPS18CQ9Y3D5 142 aaKnown RBP13.45□□□□□ -0.26
HDAC6-204ENST00000376643 ARHGAP21Q5T5U3 1957 aa13.45□□□□□ -0.26
HDAC6-204ENST00000376643 NINQ8N4C6 2090 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 GNG14A0A1W2PPG7 69 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 A0A1W2PS29 197 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 PCDH7O60245 1069 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 COQ9O75208 318 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 REM1O75628 298 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 SUPT7LO94864 414 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 CBX7O95931 251 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 RAF1P04049 648 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 ABHD2P08910 425 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 SRD5A2P31213 254 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 MPIP34949 423 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 HSD17B3P37058 310 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 CPA2P48052 419 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 NAGLUP54802 743 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 PKNOX1P55347 436 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 MGAT2Q10469 447 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 NNATQ16517 81 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 FAM111BQ6SJ93 734 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 PAMR1Q6UXH9 720 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 CHMP1BQ7LBR1 199 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 PLCZ1Q86YW0 608 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 HOMEZQ8IX15 550 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 CNRIP1Q96F85 164 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-204ENST00000376643 DACH2Q96NX9 599 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 TMUB1Q9BVT8 246 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 TAS2R10Q9NYW0 307 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 TAS2R9Q9NYW1 312 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 MRTO4Q9UKD2 239 aaKnown RBP13.44□□□□□ -0.26
HDAC6-204ENST00000376643 CBLCQ9ULV8 474 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 GPR55Q9Y2T6 319 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-204ENST00000376643 WIF1Q9Y5W5 379 aa13.44□□□□□ -0.26
HDAC6-204ENST00000376643 LINC01387J3KSC0 135 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 MANBAO00462 879 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 UGT2B11O75310 529 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 RCBTB2O95199 551 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CRHP06850 196 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CTAGE8P0CG41 777 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 FOSL1P15407 271 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 ATP5F1P24539 256 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-204ENST00000376643 EMDP50402 254 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 PNLIPRP2P54317 469 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CDH13P55290 713 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 EEFSECP57772 596 aaKnown RBP13.43□□□□□ -0.26
HDAC6-204ENST00000376643 HMGCS1Q01581 520 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 KEAP1Q14145 624 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 EXOSC7Q15024 291 aaKnown RBP13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CEBPEQ15744 281 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 OR2A2Q6IF42 318 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 TIFABQ6ZNK6 161 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 YRDCQ86U90 279 aaKnown RBP13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CTAGE4Q8IX94 777 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 FAM9CQ8IZT9 166 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CDYL2Q8N8U2 506 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 METTL6Q8TCB7 284 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms