RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 THSD1Q9NS62 852 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 KRT84Q9NSB2 600 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CUTCQ9NTM9 273 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 MYRFQ9Y2G1 1151 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 LOC100130705A0A1B0GUX0 176 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 GXYLT2A0PJZ3 443 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 SERPINB7O75635 380 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 GADD45GO95257 159 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 AGXTP21549 392 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CLK3P49761 638 aaKnown RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 PGDP52209 483 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 RAPSNQ13702 412 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 GPR68Q15743 365 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CTU2Q2VPK5 515 aaKnown RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 FGD3Q5JSP0 725 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 MFSD4BQ5TF39 518 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF555Q8NEP9 628 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 TSPAN14Q8NG11 270 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 OR10G2Q8NGC3 310 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 OR52R1Q8NGF1 315 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 OR4C15Q8NGM1 316 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 OR6T1Q8NGN1 323 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 MIPOL1Q8TD10 442 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CLIP3Q96DZ5 547 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 PRTFDC1Q9NRG1 225 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 DNAAF2Q9NVR5 837 aaKnown RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 C19orf53Q9UNZ5 99 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 DTX4Q9Y2E6 619 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CLDN16Q9Y5I7 305 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 WDFY3Q8IZQ1 3526 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 A0A1W2PQM1 296 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 A8MUA0 341 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 PDE9AO76083 593 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 NSA2O95478 260 aaKnown RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 TFAP2AP05549 437 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CCL7P80098 99 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 SEC23BQ15437 767 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CDC73Q6P1J9 531 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 KRT73Q86Y46 540 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CLIP4Q8N3C7 705 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 GIPC3Q8TF64 312 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 POP5Q969H6 163 aaKnown RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF354BQ96LW1 612 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 EPYCQ99645 322 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 NPLQ9BXD5 320 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 NECTIN3Q9NQS3 549 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 NLGN3Q9NZ94 848 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 PDP2Q9P2J9 529 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 C3orf18Q9UK00 162 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 CHST2Q9Y4C5 530 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 ORC6Q9Y5N6 252 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 H3BMH7 237 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ADAMDEC1O15204 470 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF749O43361 778 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 CBX7O95931 251 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 CLPTM1O96005 669 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 PIGFQ07326 219 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF311Q5JNZ3 666 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ATAD3BQ5T9A4 648 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 SHISA6Q6ZSJ9 500 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ZAR1Q86SH2 424 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 PIK3C3Q8NEB9 887 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 OR4N2Q8NGD1 307 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 BBS10Q8TAM1 723 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 CNIH3Q8TBE1 160 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 GPR151Q8TDV0 419 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-206ENST00000376496 CNPPD1Q9BV87 410 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 RAB33BQ9H082 229 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 GABARAPL1Q9H0R8 117 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ING2Q9H160 280 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 NMNAT1Q9HAN9 279 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-206ENST00000376496 FER1L5A0AVI2 2057 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 H0YAE9 185 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 M0R129 80 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 GDF9O60383 454 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 DNAJB5O75953 348 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 GABRA3P34903 492 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 AVPR1BP47901 424 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 EFNA3P52797 238 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 RAD23AP54725 363 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 KCNC4Q03721 635 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 CD47Q08722 323 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF155Q12901 538 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ELOAQ14241 798 aaKnown RBP11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF267Q14586 743 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-206ENST00000376496 GRM7Q14831 915 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 FRRS1Q6ZNA5 592 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF605Q86T29 641 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 SAMD14Q8IZD0 417 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-206ENST00000376496 VWA5B2Q8N398 1253 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 DTWD2Q8NBA8 298 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 OR4C6Q8NH72 309 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 PHF10Q8WUB8 498 aaKnown RBP11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF347Q96SE7 839 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 ADNPQ9H2P0 1102 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 PTGFRNQ9P2B2 879 aa11.75□□□□□ -0.53
CLCN6-206ENST00000376496 BCKDKO14874 412 aa11.74□□□□□ -0.53
CLCN6-206ENST00000376496 IFNA16P05015 189 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms