RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 KLK1P06870 262 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 IL7RP16871 459 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 TAS2R50P59544 299 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 COPZ1P61923 177 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 HBA1P69905 142 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 RBBP4Q09028 425 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 ILKQ13418 452 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 KEAP1Q14145 624 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 ELOAQ14241 798 aaKnown RBP13.43□□□□□ -0.26
HMGA1-203ENST00000374116 ARMC6Q6NXE6 501 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 GALNT10Q86SR1 603 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 CYP4Z1Q86W10 505 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 OR52N2Q8NGI0 321 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 OR2L8Q8NGY9 312 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 ZFPM2Q8WW38 1151 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 SMPDL3AQ92484 453 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 TRIM63Q969Q1 353 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 TPD52L3Q96J77 140 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 CCDC74BQ96LY2 380 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 OR2A14Q96R47 310 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 SLC35A5Q9BS91 424 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 DOHHQ9BU89 302 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 NT5DC2Q9H857 520 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 PADI2Q9Y2J8 665 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 WBP11Q9Y2W2 641 aaKnown RBP13.43□□□□□ -0.26
HMGA1-203ENST00000374116 SAMHD1Q9Y3Z3 626 aaKnown RBP13.43□□□□□ -0.26
HMGA1-203ENST00000374116 PCDHGA3Q9Y5H0 932 aa13.43□□□□□ -0.26
HMGA1-203ENST00000374116 C6orf47O95873 294 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 GBAP04062 536 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 KRT8P05787 483 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 UGT2B7P16662 529 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 CRATP43155 626 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 DAPP51397 102 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 MVDP53602 400 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 KCNJ10P78508 379 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 E2F1Q01094 437 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 TARDBPQ13148 414 aaKnown RBP eCLIP13.42□□□□□ -0.26
HMGA1-203ENST00000374116 FADDQ13158 208 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 CDK10Q15131 360 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 AGAP6Q5VW22 663 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 TMEM71Q6P5X7 295 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 DGLUCYQ7Z3D6 616 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 C17orf64Q86WR6 236 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 FAR1Q8WVX9 515 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 C7orf34Q96L11 122 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 AGAP4Q96P64 663 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 NODALQ96S42 347 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 EPYCQ99645 322 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 BARD1Q99728 777 aaKnown RBP13.42□□□□□ -0.26
HMGA1-203ENST00000374116 PITHD1Q9GZP4 211 aaPredicted RBP13.42□□□□□ -0.26
HMGA1-203ENST00000374116 OR6C2Q9NZP2 312 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 PDP1Q9P0J1 537 aaPredicted RBP13.42□□□□□ -0.26
HMGA1-203ENST00000374116 TAC3Q9UHF0 121 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 OSGIN1Q9UJX0 560 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 CLCA2Q9UQC9 943 aa13.42□□□□□ -0.26
HMGA1-203ENST00000374116 IGHV5-51A0A0C4DH38 117 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 SLC1A7O00341 560 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 CSO75390 466 aaKnown RBP13.41□□□□□ -0.26
HMGA1-203ENST00000374116 TNFRSF21O75509 655 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 SEMA3DO95025 777 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 C9P02748 559 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 CRYBA2P53672 197 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 P2RX3P56373 397 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 SELENOWP63302 87 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 REEP5Q00765 189 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 FOXK2Q01167 660 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 MC1RQ01726 317 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 KCNAB1Q14722 419 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 IQCCQ4KMZ1 466 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 GCNT6Q5T4J0 391 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 LAIR2Q6ISS4 152 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 TRIM40Q6P9F5 258 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 WDR74Q6RFH5 385 aaPredicted RBP13.41□□□□□ -0.26
HMGA1-203ENST00000374116 PLXDC1Q8IUK5 500 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 SLITRK4Q8IW52 837 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 ANKRD53Q8N9V6 530 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 GRPEL2Q8TAA5 225 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 FLVCR1-AS1Q8TAF5 88 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 NDNFQ8TB73 568 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 AIF1LQ9BQI0 150 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
HMGA1-203ENST00000374116 TMEM38AQ9H6F2 299 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 SLA2Q9H6Q3 261 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 CUEDC1Q9NWM3 386 aaPredicted RBP13.41□□□□□ -0.26
HMGA1-203ENST00000374116 TAS2R9Q9NYW1 312 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 ZNF221Q9UK13 617 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 PRELID1Q9Y255 219 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 ANKDD1BA6NHY2 528 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 C2orf74A8MZ97 194 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 ZW10O43264 779 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 MITFO75030 526 aaPredicted RBP13.41□□□□□ -0.26
HMGA1-203ENST00000374116 INMTO95050 263 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 DIRAS1O95057 198 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 ST6GAL1P15907 406 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 UGT2B10P36537 528 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
HMGA1-203ENST00000374116 TUBA1BP68363 451 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 IL5RAQ01344 420 aa13.41□□□□□ -0.26
HMGA1-203ENST00000374116 CDK5R2Q13319 367 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms