RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 ABATP80404 500 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 VLDLRP98155 873 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CDK6Q00534 326 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 NHLH2Q02577 135 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 FPGSQ05932 587 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CD69Q07108 199 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 C2orf80Q0P641 193 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 COX10Q12887 443 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RAPSNQ13702 412 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SCARB2Q14108 478 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CLCA4Q14CN2 919 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 C16orf72Q14CZ0 275 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CTF1Q16619 201 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 LRRC26Q2I0M4 334 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RGS21Q2M5E4 152 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CTU2Q2VPK5 515 aaKnown RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 FGD3Q5JSP0 725 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 PRAMEF14Q5SWL7 426 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 DEPDC1Q5TB30 811 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ABHD17BQ5VST6 288 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 KHDRBS2Q5VWX1 349 aaKnown RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 MEDAGQ5VYS4 303 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RNLSQ5VYX0 342 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 METRNLQ641Q3 311 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RAET1GQ6H3X3 334 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 LAIR2Q6ISS4 152 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 REEP3Q6NUK4 255 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 C16orf87Q6PH81 154 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 FBXO46Q6PJ61 603 aaPredicted RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 GDPGP1Q6ZNW5 385 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RFLNAQ6ZTI6 216 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ZNF551Q7Z340 670 aaPredicted RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 TRMT11Q7Z4G4 463 aaKnown RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 TMEM179BQ7Z7N9 219 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 TMPRSS11BQ86T26 416 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RBM23Q86U06 439 aaKnown RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SLC9B2Q86UD5 537 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 LRRTM4Q86VH4 590 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 NUDT13Q86X67 352 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 TRAPPC5Q8IUR0 188 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SLC44A2Q8IWA5 706 aaPredicted RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 NAGSQ8N159 534 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ZNF540Q8NDQ6 660 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CPEB3Q8NE35 698 aaKnown RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SRFBP1Q8NEF9 429 aaKnown RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 BPIFB6Q8NFQ5 453 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 OR5K2Q8NHB8 316 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RHOXF1Q8NHV9 184 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 C16orf78Q8WTQ4 265 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 HERVK_113Q902F9 699 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SMPDL3AQ92484 453 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SUSD6Q92537 303 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SMARCD2Q92925 531 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 YIPF6Q96EC8 236 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 NEURL3Q96EH8 262 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 TCEAL4Q96EI5 215 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ZBED6CLQ96FA7 236 aaPredicted RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 PDXPQ96GD0 296 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ZNF607Q96SK3 696 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ELF4Q99607 663 aaPredicted RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CDCA3Q99618 268 aaPredicted RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 PIP5K1AQ99755 562 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SLC35A5Q9BS91 424 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 DCUN1D5Q9BTE7 237 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SARGQ9BW04 601 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 C1QTNF7Q9BXJ2 289 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 EBPLQ9BY08 206 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ITPAQ9BY32 194 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 LMAN2LQ9H0V9 348 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 OR52A5Q9H2C5 316 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 MMP27Q9H306 513 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 RIBC2Q9H4K1 309 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SYNDIG1Q9H7V2 258 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ACOT13Q9NPJ3 140 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 MIEF1Q9NQG6 463 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 EXD2Q9NVH0 621 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 FKBP14Q9NWM8 211 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 HCFC1R1Q9NWW0 138 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 NDUFAF4Q9P032 175 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 SPASTQ9UBP0 616 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ITGB1BP2Q9UKP3 347 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ABCG2Q9UNQ0 655 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 MGAT4BQ9UQ53 548 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 CLCA2Q9UQC9 943 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ERGIC3Q9Y282 383 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 UGT2A1Q9Y4X1 527 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 KLK4Q9Y5K2 254 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 MAGED1Q9Y5V3 778 aaPredicted RBP5.03□□□□□ -1.6
LINC00474-201ENST00000374014 LYVE1Q9Y5Y7 322 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 WNT6Q9Y6F9 365 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 ENPP4Q9Y6X5 453 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 TET1Q8NFU7 2136 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 PLXNB3Q9ULL4 1909 aa5.03□□□□□ -1.6
LINC00474-201ENST00000374014 PNMA8CA0A1B0GUJ8 204 aa5.02□□□□□ -1.61
LINC00474-201ENST00000374014 IRGMA1A4Y4 181 aa5.02□□□□□ -1.61
LINC00474-201ENST00000374014 TMEM202A6NGA9 273 aa5.02□□□□□ -1.61
LINC00474-201ENST00000374014 HIDE1A8MVS5 230 aa5.02□□□□□ -1.61
LINC00474-201ENST00000374014 C5orf58C9J3I9 102 aa5.02□□□□□ -1.61
LINC00474-201ENST00000374014 PTGES3LE9PB15 166 aa5.02□□□□□ -1.61
LINC00474-201ENST00000374014 TAF4O00268 1085 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms