RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ZCCHC4Q9H5U6 513 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF302Q9NR11 478 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TUBG2Q9NRH3 451 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CFAP97Q9P2B7 532 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 YIF1AO95070 293 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CD86P42081 329 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 YIF1BQ5BJH7 314 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HLA-DQA1Q5Y7H0 255 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM246Q9BRR3 403 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR10A4Q9H209 315 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SPHK1Q9NYA1 384 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LRG1P02750 347 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PDGFAP04085 211 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MGMTP16455 207 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 RPA3P35244 121 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MTNR1BP49286 362 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MSMO1Q15800 293 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PM20D1Q6GTS8 502 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OPN5Q6U736 354 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR6S1Q8NH40 331 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PCDH19Q8TAB3 1148 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 NEIL3Q8TAT5 605 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 RASD2Q96D21 266 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 C17orf62Q9BQA9 187 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 WFDC1Q9HC57 220 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TRBV9A0A0B4J1U6 114 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FBLL1A6NHQ2 334 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SEC14L6B5MCN3 397 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ARPC2O15144 300 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GAPDHP04406 335 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LPOP22079 712 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 EMC4Q5J8M3 183 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MAML2Q8IZL2 1156 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LSMEM1Q8N8F7 131 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR51T1Q8NGJ9 327 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SCG5P05408 212 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 RPA2P15927 270 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TACR3P29371 465 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HTRA3P83110 453 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ATPAF1Q5TC12 328 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OVOS1Q6IE37 1185 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 NRROSQ86YC3 692 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 APMAPQ9HDC9 416 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SUPT3HB4E1H0 165 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ADGRG2Q8IZP9 1017 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TRPV4Q9HBA0 871 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FZD10Q9ULW2 581 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SH2B3Q9UQQ2 575 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TFPIP10646 304 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CPB1P15086 417 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SERPINA2P20848 420 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ARF3P61204 181 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ARF1P84077 181 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HEPHL1Q6MZM0 1159 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF709Q8N972 641 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 DUSP18Q8NEJ0 188 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 C3orf30Q96M34 536 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CIB3Q96Q77 187 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF426Q9BUY5 554 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 BOLA1Q9Y3E2 137 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 H3BMQ9 156 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HSPB1P04792 205 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ADRB1P08588 477 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SLC35D3Q5M8T2 416 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FAM219BQ5XKK7 198 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 DRAM2Q6UX65 266 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CHST6Q9GZX3 395 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 KLHL9Q9P2J3 617 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF705EA8MWA4 302 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GPANK1O95872 356 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 NPBWR2P48146 333 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LCN2P80188 198 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PCSK7Q16549 785 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 NRF1Q16656 503 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF628Q5EBL2 1059 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 DCST1Q5T197 706 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FAM83HQ6ZRV2 1179 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 WFIKKN2Q8TEU8 576 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FCRL5Q96RD9 977 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMLHEQ9NVH6 421 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PTRH2Q9Y3E5 179 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1B0GTI1 187 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF14P17017 642 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF133P52736 654 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 RRAS2P62070 204 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TLE4Q04727 773 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CHIT1Q13231 466 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ALG10Q5BKT4 473 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SP8Q8IXZ3 490 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR8H3Q8N146 312 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR14A2Q96R54 314 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FAM105AQ9NUU6 356 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TREM2Q9NZC2 230 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PRR5-ARHGAP8B1AHC4 643 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR6B1O95007 311 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TPGS2Q68CL5 300 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LYSMD2Q8IV50 215 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 FAM83FQ8NEG4 500 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TPD52L3Q96J77 140 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms