RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 GCNT6Q5T4J0 391 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 MFSD12Q6NUT3 480 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 TNFAIP8L2Q6P589 184 aaPredicted RBP19.21■□□□□ 0.67
SHISA4-201ENST00000362011 ERICH5Q6P6B1 374 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 CPEB2Q7Z5Q1 589 aaKnown RBP19.21■□□□□ 0.67
SHISA4-201ENST00000362011 MICU2Q8IYU8 434 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 HORMAD2Q8N7B1 307 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 MORN4Q8NDC4 146 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 SIMC1Q8NDZ2 872 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 OR7G1Q8NGA0 311 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 MIPOL1Q8TD10 442 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 REXO5Q96IC2 774 aaKnown RBP19.21■□□□□ 0.67
SHISA4-201ENST00000362011 GPR87Q9BY21 358 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 ACTRT3Q9BYD9 372 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 SERHL2Q9H4I8 314 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 TCFL5Q9UL49 500 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 USP22Q9UPT9 525 aa19.21■□□□□ 0.67
SHISA4-201ENST00000362011 TENM4Q6N022 2769 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 ELOVL7A1L3X0 281 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 SAGE2PA6NJ88 616 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 HRKO00198 91 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 TNFRSF21O75509 655 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 TMPRSS3P57727 454 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 ZNF155Q12901 538 aaPredicted RBP19.2■□□□□ 0.66
SHISA4-201ENST00000362011 FAM69BQ5VUD6 431 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 CDC73Q6P1J9 531 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 ZCCHC12Q6PEW1 402 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 ZZZ3Q8IYH5 903 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 SLC2A12Q8TD20 617 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 NKD1Q969G9 470 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 C16orf58Q96GQ5 468 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 SENP5Q96HI0 755 aaPredicted RBP19.2■□□□□ 0.66
SHISA4-201ENST00000362011 YIPF4Q9BSR8 244 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 OR10A5Q9H207 317 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 MUC13Q9H3R2 512 aa19.2■□□□□ 0.66
SHISA4-201ENST00000362011 THUMPD1Q9NXG2 353 aaKnown RBP19.2■□□□□ 0.66
SHISA4-201ENST00000362011 LOC102723996A0A087X1L8 192 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 LOC101059948A0A1B0GTJ6 334 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 STAMBPO95630 424 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 DDAH2O95865 285 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 MSX2P35548 267 aaPredicted RBP19.19■□□□□ 0.66
SHISA4-201ENST00000362011 RPS18P62269 152 aaKnown RBP19.19■□□□□ 0.66
SHISA4-201ENST00000362011 EEF1A2Q05639 463 aaKnown RBP19.19■□□□□ 0.66
SHISA4-201ENST00000362011 DUSP8Q13202 625 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 TRIM25Q14258 630 aaKnown RBP19.19■□□□□ 0.66
SHISA4-201ENST00000362011 PAPD4Q6PIY7 484 aaKnown RBP19.19■□□□□ 0.66
SHISA4-201ENST00000362011 RNF111Q6ZNA4 994 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 PTOV1Q86YD1 416 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 LGI4Q8N135 537 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 IL22RA1Q8N6P7 574 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 CDRT4Q8N9R6 151 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 ADAMTS15Q8TE58 950 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 ZNF721Q8TF20 911 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 JADE3Q92613 823 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 ASB9Q96DX5 294 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 OR7D2Q96RA2 312 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 LPAR4Q99677 370 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 DPH1Q9BZG8 443 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 OR8D2Q9GZM6 311 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 COPS7AQ9UBW8 275 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 POMPQ9Y244 141 aa19.19■□□□□ 0.66
SHISA4-201ENST00000362011 IGHV3-20A0A0C4DH32 117 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 TERTO14746 1132 aaKnown RBP19.18■□□□□ 0.66
SHISA4-201ENST00000362011 GSTA4O15217 222 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 ASNA1O43681 348 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 NUDT7P0C024 238 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 LIPCP11150 499 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 MMP11P24347 488 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 RBBP4Q09028 425 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 TRAP1Q12931 704 aaKnown RBP19.18■□□□□ 0.66
SHISA4-201ENST00000362011 VMACQ2NL98 169 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 C1orf146Q5VVC0 180 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 DTX1Q86Y01 620 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 PTRH1Q86Y79 214 aaKnown RBP19.18■□□□□ 0.66
SHISA4-201ENST00000362011 ZNF615Q8N8J6 731 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 FAM13CQ8NE31 585 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 OR5D16Q8NGK9 328 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 FBXO30Q8TB52 745 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 TTC9Q92623 222 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 C8orf44Q96CB5 159 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 PCDHAC1Q9H158 963 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 TMEM38AQ9H6F2 299 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 FOLH1BQ9HBA9 442 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 PRODH2Q9UF12 536 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 EGFL7Q9UHF1 273 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 KCND3Q9UK17 655 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 CFL2Q9Y281 166 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 RRP15Q9Y3B9 282 aaKnown RBP19.18■□□□□ 0.66
SHISA4-201ENST00000362011 HEMK1Q9Y5R4 338 aaPredicted RBP19.18■□□□□ 0.66
SHISA4-201ENST00000362011 HS3ST3B1Q9Y662 390 aa19.18■□□□□ 0.66
SHISA4-201ENST00000362011 TMEM247A6NEH6 219 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 DUXAA6NLW8 204 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 J3QKU1 62 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 HMGN4O00479 90 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 NME6O75414 186 aaPredicted RBP19.17■□□□□ 0.66
SHISA4-201ENST00000362011 GMNNO75496 209 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 AGR2O95994 175 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 CLPSP04118 112 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 IGKV3-11P04433 115 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 ALOX5P09917 674 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms