RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PCNPQ8WW12 178 aaKnown RBP9.96□□□□□ -0.81
SMC3-201ENST00000361804 NACC2Q96BF6 587 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 UPRTQ96BW1 309 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 GDF15Q99988 308 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 SLC22A4Q9H015 551 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 MED20Q9H944 212 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 CLEC4AQ9UMR7 237 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 ALG5Q9Y673 324 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 CSNK1G3Q9Y6M4 447 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 A0A087WUU8 490 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 GTPBP1O00178 669 aaKnown RBP9.96□□□□□ -0.82
SMC3-201ENST00000361804 KIAA0355O15063 1070 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 TSC22D2O75157 780 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 LIMS3P0CW19 117 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 LIMS4P0CW20 117 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 ACADLP28330 430 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 ZNF33BQ06732 778 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 E2F2Q14209 437 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 SLC35F1Q5T1Q4 408 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 Q8N402 240 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 FUZQ9BT04 418 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 WACQ9BTA9 647 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 SAP130Q9H0E3 1048 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 RNF121Q9H920 327 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 TESQ9UGI8 421 aaKnown RBP9.96□□□□□ -0.82
SMC3-201ENST00000361804 SF3B6Q9Y3B4 125 aaKnown RBP9.96□□□□□ -0.82
SMC3-201ENST00000361804 HMX3A6NHT5 357 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 LANCL1O43813 399 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 GNSP15586 552 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 ITGB7P26010 798 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 TMEM107Q6UX40 140 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 ASB18Q6ZVZ8 466 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 NR2C2APQ86WQ0 139 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 SP7Q8TDD2 431 aaPredicted RBP9.96□□□□□ -0.82
SMC3-201ENST00000361804 TFGQ92734 400 aaPredicted RBP9.96□□□□□ -0.82
SMC3-201ENST00000361804 TIFAQ96CG3 184 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 FRMD6Q96NE9 622 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 SAGE1Q9NXZ1 904 aa9.96□□□□□ -0.82
SMC3-201ENST00000361804 PRR23AA6NEV1 266 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 SCO2O43819 266 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 ENDOUP21128 410 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 HOXD10P28358 340 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 TRHRP34981 398 aaPredicted RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 HTR2BP41595 481 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 NCBP2P52298 156 aaKnown RBP eCLIP9.95□□□□□ -0.821e-8■■■■■ 35.5
SMC3-201ENST00000361804 WNT4P56705 351 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 TEKQ02763 1124 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 TMEM201Q5SNT2 666 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 PLPP4Q5VZY2 271 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 TBC1D19Q8N5T2 526 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 MORN4Q8NDC4 146 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 OR8K5Q8NH50 307 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 NUS1Q96E22 293 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 KCTD7Q96MP8 289 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 SNX18Q96RF0 628 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 DPH7Q9BTV6 452 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 MS4A8Q9BY19 250 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 RNF208Q9H0X6 261 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 ISG20L2Q9H9L3 353 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 A4GALTQ9NPC4 353 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 RPRD1BQ9NQG5 326 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 IRAK3Q9Y616 596 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 IQCMA0A1B0GVH7 501 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 SYPP08247 313 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 CISD3P0C7P0 127 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 SLC2A2P11168 524 aaPredicted RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 MYL12AP19105 171 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 EVI2BP34910 448 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 PCBP4P57723 403 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 ZNF77Q15935 545 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 NDUFA5Q16718 116 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 DDI2Q5TDH0 399 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 NDUFAF5Q5TEU4 345 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 C18orf63Q68DL7 685 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 MTFR2Q6P444 385 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 C17orf64Q86WR6 236 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 NKAIN4Q8IVV8 208 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 VWA5B2Q8N398 1253 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 LINC01555Q8NAE3 123 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 ZNF784Q8NCA9 323 aaPredicted RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 ZNF707Q96C28 371 aaPredicted RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 METTL2AQ96IZ6 378 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 SLC35G5Q96KT7 338 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 FCRL4Q96PJ5 515 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 OSGEPL1Q9H4B0 414 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 DIMT1Q9UNQ2 313 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 PLEKHM1Q9Y4G2 1056 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 A8MVJ9 347 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 SOCS6O14544 535 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 TIMP1P01033 207 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 PCCBP05166 539 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 HMGN2P05204 90 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 CPEP16870 476 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 TBXA2RP21731 343 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 NNMTP40261 264 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 AGFG1P52594 562 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 CSTF1Q05048 431 aaKnown RBP9.95□□□□□ -0.82
SMC3-201ENST00000361804 LTB4RQ15722 352 aa9.95□□□□□ -0.82
SMC3-201ENST00000361804 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms