RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 SNAP47Q5SQN1 464 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 C9orf50Q5SZB4 431 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 AGBL4Q5VU57 503 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 PLEKHG7Q6ZR37 379 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 SLC46A3Q7Z3Q1 461 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 FAM98AQ8NCA5 519 aaKnown RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 OR2A1Q8NGT9 310 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 OR2L8Q8NGY9 312 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 PIK3R3Q92569 461 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 RPP25Q9BUL9 199 aaKnown RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 GABARAPL3Q9BY60 117 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 RACGAP1Q9H0H5 632 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 TMEM168Q9H0V1 697 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 EGLN3Q9H6Z9 239 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 ZNF226Q9NYT6 803 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 CLEC2DQ9UHP7 191 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 EXO1Q9UQ84 846 aaKnown RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 A0A1W2PR48 441 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 LDB3O75112 727 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 LIM2P55344 173 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 ABHD17CQ6PCB6 329 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 DHRS4L2Q6PKH6 230 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 SLC36A4Q6YBV0 504 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 VN1R5Q7Z5H4 357 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 MARCH9Q86YJ5 346 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 ADGRF3Q8IZF5 1079 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 FBXL6Q8N531 539 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 GNPDA2Q8TDQ7 276 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 TTTY10Q9BZA0 68 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 CAB39Q9Y376 341 aaPredicted RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 CACNA1IQ9P0X4 2223 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 ARHGAP33O14559 1287 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 HOXB3P14651 431 aaPredicted RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 GNSP15586 552 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 PCMT1P22061 227 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 CD40LGP29965 261 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 GCGRP47871 477 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 RPS15AP62244 130 aaKnown RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 SHC2P98077 582 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 IL18Q14116 193 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 SAXO2Q658L1 398 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 KIAA1211LQ6NV74 962 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 LINC01555Q8NAE3 123 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 OR51A7Q8NH64 312 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 CHPT1Q8WUD6 406 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 AP3S1Q92572 193 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 PITX2Q99697 317 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 PBX4Q9BYU1 374 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 A4GALTQ9NPC4 353 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 STARD5Q9NSY2 213 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 SACM1LQ9NTJ5 587 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 TNFRSF10DQ9UBN6 386 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 MRPS33Q9Y291 106 aaKnown RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 PIAS3Q9Y6X2 628 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 TCRBV21S2A2A0A5A6 115 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 CCDC182A6NF36 153 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 NPIPB8E9PQR5 432 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 GABRA3P34903 492 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 DRD3P35462 400 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 SKP1P63208 163 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 PCDH1Q08174 1060 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 COX10Q12887 443 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 PDE7AQ13946 482 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 EIPR1Q53HC9 387 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 DDI2Q5TDH0 399 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 MEDAGQ5VYS4 303 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ZC3H14Q6PJT7 736 aaKnown RBP10.53□□□□□ -0.72
SSU72-202ENST00000359060 CDS1Q92903 461 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 MOAP1Q96BY2 351 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 MYADMQ96S97 322 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ACTRT3Q9BYD9 372 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 RMI1Q9H9A7 625 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ANKHQ9HCJ1 492 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 CSNK1G3Q9Y6M4 447 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 MTNR1AP48039 350 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ZNF45Q02386 682 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 POMZP3Q6PJE2 187 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 PRSS58Q8IYP2 241 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 GOT1L1Q8NHS2 421 aaPredicted RBP10.53□□□□□ -0.72
SSU72-202ENST00000359060 CCL4L1Q8NHW4 92 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 FGF14Q92915 247 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 SECISBP2Q96T21 854 aaKnown RBP10.53□□□□□ -0.72
SSU72-202ENST00000359060 TBC1D29Q9UFV1 150 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ADAM30Q9UKF2 790 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 GTF2A1LQ9UNN4 478 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ASCC3Q8N3C0 2202 aaKnown RBP10.53□□□□□ -0.72
SSU72-202ENST00000359060 DAPL1A0PJW8 107 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 GPR89AB7ZAQ6 455 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 HMGN1P05114 100 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 GKN3PP0CG01 181 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 GPR89BP0CG08 455 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ALAS2P22557 587 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ZNF791Q3KP31 576 aaPredicted RBP10.53□□□□□ -0.72
SSU72-202ENST00000359060 OR2G6Q5TZ20 316 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 METTL27Q8N6F8 245 aaPredicted RBP10.53□□□□□ -0.72
SSU72-202ENST00000359060 MINDY2Q8NBR6 621 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 OR4C6Q8NH72 309 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 MS4A6EQ96DS6 147 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 PRRC1Q96M27 445 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms