RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RLIMQ9NVW2 624 aa14.18□□□□□ -0.14
LMX1B-201ENST00000355497 MPPED1O15442 326 aa14.18□□□□□ -0.14
LMX1B-201ENST00000355497 GGT1P19440 569 aa14.18□□□□□ -0.14
LMX1B-201ENST00000355497 IDH3GP51553 393 aaPredicted RBP14.18□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF136P52737 540 aa14.18□□□□□ -0.14
LMX1B-201ENST00000355497 RPS26P62854 115 aaKnown RBP14.18□□□□□ -0.14
LMX1B-201ENST00000355497 TEX26Q8N6G2 289 aa14.18□□□□□ -0.14
LMX1B-201ENST00000355497 NLKQ9UBE8 527 aa14.18□□□□□ -0.14
LMX1B-201ENST00000355497 F5H5P2 479 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 PTTG1O95997 202 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 MAOAP21397 527 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 RFC2P35250 354 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 MTNR1AP48039 350 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 HES5Q5TA89 166 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 CTU1Q7Z7A3 348 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 CHCHD4Q8N4Q1 142 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 OR51T1Q8NGJ9 327 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 C22orf15Q8WYQ4 148 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 PCYT1BQ9Y5K3 369 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 A8MXE2 369 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 UBE2NP61088 152 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 CYCSP99999 105 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 RAB31Q13636 194 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 FAM69BQ5VUD6 431 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 KIAA0319Q5VV43 1072 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 PLBD1Q6P4A8 553 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF695Q8IW36 515 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF619Q8N2I2 560 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 GOLM1Q8NBJ4 401 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF461Q8TAF7 563 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 BIN3Q9NQY0 253 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 PPP1R14DQ9NXH3 145 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 A0A0U1RQK1 487 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 FGF18O76093 207 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 TMEM225BP0DP42 221 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 EPHA1P21709 976 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 AQP2P41181 271 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ELP2Q6IA86 826 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF767PQ75MW2 155 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 OR10T2Q8NGX3 314 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 IMP4Q96G21 291 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 SLA2Q9H6Q3 261 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 CNOT11Q9UKZ1 510 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 DENRO43583 198 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 SOD2P04179 222 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 TAS2R38P59533 333 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 SNRPD2P62316 118 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 PLGLAQ15195 96 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 DUS1LQ6P1R4 473 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 BLOC1S3Q6QNY0 202 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 TMEM150AQ86TG1 271 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 OR4K13Q8NH42 304 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 GCDHQ92947 438 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF689Q96CS4 500 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 CHFRQ96EP1 664 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 MRGPRX2Q96LB1 330 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 AIPO00170 330 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 RNGTTO60942 597 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 TAS2R20P59543 309 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 RPP30P78346 268 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 DYRK1AQ13627 763 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 PON2Q15165 354 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 FIGNL1Q6PIW4 674 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 C6orf89Q6UWU4 347 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 FAM43BQ6ZT52 329 aaPredicted RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 MRPL41Q8IXM3 137 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 SLC35F2Q8IXU6 374 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 NANOS1Q8WY41 292 aaKnown RBP14.17□□□□□ -0.14
LMX1B-201ENST00000355497 APMAPQ9HDC9 416 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 KLHL13Q9P2N7 655 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 PTGDR2Q9Y5Y4 395 aa14.17□□□□□ -0.14
LMX1B-201ENST00000355497 ARGFXA6NJG6 315 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 COCHO43405 550 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 HTR3BO95264 441 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 ADAP00813 363 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 UGT2B7P16662 529 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 ARL6IP1Q15041 203 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 PCGF3Q3KNV8 242 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 FAM83HQ6ZRV2 1179 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-201ENST00000355497 GDPD1Q8N9F7 314 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 SLC41A3Q96GZ6 507 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 LMF1Q96S06 567 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 APBB3O95704 486 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 LCKP06239 509 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 CLCN2P51788 898 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 TAS2R31P59538 309 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 ERVK-16P61578 105 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 FRZBQ92765 325 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 LRIG1Q96JA1 1093 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF681Q96N22 645 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 BCAS3Q9H6U6 928 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 GPRC5BQ9NZH0 403 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 TRAV18A0A075B6X5 111 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 SYT7O43581 403 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 MYF6P23409 242 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 PPP5CP53041 499 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 KCTD20Q7Z5Y7 419 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 UEVLDQ8IX04 471 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 ESX1Q8N693 406 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms